EY679231

Overview
NameEY679231
Unique NameEY679231
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1000
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679231 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.069e-12
Identity = 59/187 (31.55%), Postives = 92/187 (49.20%), Query Frame = 1 
Query:  211 IPIIDFSMLTSGSPEQRYKTIQAIGNACLKWGFFEVINHGVPNTLRDEMMRASESFFDLSDEQKREYAGKKLFDP-IRWGTS---FNV*CRQDIILEG*PEDPRPSPVHCLLKILLGFSETIQEYCKKIRKLAN---EITEKGLG-KV*EWKKAYFIKGMEFWKKFPFIGLCVILTPPCPSPEKMDG 747
            IP+IDFS L     ++R +T+  I N C +WGFF+++NHG+P  L + + + S   + L +E+       +L D  ++ G      NV      +L+   E P   P          F ET++EY ++IRKLA    E+ ++ LG +    KKA+   G    +  PF G  V   PPCP  + + G
Sbjct:    3 IPVIDFSKLDG---KERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREERFEGSKPVQLLDTLVKEGDGQRLDNVDWEDVFVLQDDNEWPSNPP---------DFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDG----QHPPFFGTKVSHYPPCPRLDLVKG 173
The following BLAST results are available for this feature:
BLAST of EY679231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ACCO_MUSAC6.069e-1231.551-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-056-H05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679231 ID=EY679231; Name=EY679231; organism=Citrus sinensis; type=EST; length=1000bp
CACCCGTCCGTCTTATTATACAGGACTAGCCCCTTTTATAGATAGTTTCA
TAATATTTATACAGAAGCCTTCACACCTTGGAATACATATATATGAAAAA
TGTTTTGTGTGAAAGGATTAATCGAATCAGGTCGTCTCACATCTGTTCCT
TCTAGGTATTTCTTTGAAAAATATCTTAAGGATGATTGCATAAACTCAGA
AGCAGAAACAATCCCCATCATAGACTTTTCTATGCTTACTTCTGGTTCTC
CGGAACAACGTTACAAGACAATCCAAGCCATCGGCAATGCATGCCTCAAA
TGGGGGTTCTTTGAGGTAATTAATCATGGAGTACCGAACACATTGCGAGA
TGAGATGATGAGGGCAAGTGAAAGTTTCTTCGATCTGTCGGACGAGCAAA
AGAGAGAGTACGCAGGAAAGAAGCTGTTTGATCCAATAAGATGGGGGACA
AGCTTCAACGTTTAATGTCGACAAGACATTATTCTGGAGGGATAACCTGA
AGATCCACGTCCATCCCCAGTTCATTGCCTCCTCAAAATCCTTCTTGGGT
TCAGTGAAACCATACAAGAATATTGCAAAAAAATTCGAAAATTGGCCAAT
GAAATAACTGAAAAGGGATTAGGAAAAGTTTAGGAATGGAAAAAAGCCTA
CTTTATAAAGGGCATGGAATTTTGGAAAAAATTCCCCTTCATTGGCTTGT
GCGTAATTTTAACCCCTCCTTGTCCAAGCCCTGAAAAAATGGATGGGGGC
GGCCCCCCTTTTTTCGGAATTAAGGACTCCTAAACCCTTCCTTAATGCAA
AAAAGAACCAATGTAGGTTTTTCTCGTTTTCGGCCAAAAGGTAAAAATGA
ATTCCCCCTCTACTCCCCCCCCCCCGGGGGCTCTCTTCTGAAATCAACCA
AATGAAAAAAACCCCCTGGAGTGAAAAAAAAAAAAATAACCAGAAAAAAA
AAAAAAAAAAAAGGCGGTGGTATGCCCAACAAAAGATTCTAAATTTGAAT
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