EY679174

Overview
NameEY679174
Unique NameEY679174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679174 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.754e-12
Identity = 33/88 (37.50%), Postives = 44/88 (50.00%), Query Frame = 2 
Query:   89 MANTKSSCLPLYEKVFHKNTYHRAXXXXXXXXXXXXXXXXXXXXKNHGFAWFLAFLSESCFTFIWILIVNCKWTPLTYITYPQCLLER 352
            MA + S   PL E++ HK+ + RA                          W +AFL E+CFTF+W+LI N KW+P  Y TYP+ L ER
Sbjct:    1 MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDTVWIVAFLCETCFTFVWLLITNIKWSPADYKTYPERLDER 88

HSP 2 Score: 25.7942 bits (55), Expect = 2.754e-12
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1 
Query:  466 IHVQPPIDMFATPAD 510
            +H  PP+DMF T AD
Sbjct:   89 VHELPPVDMFVTTAD 103
The following BLAST results are available for this feature:
BLAST of EY679174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CSLB4_ARATH2.754e-1237.50Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-056-B06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679174 ID=EY679174; Name=EY679174; organism=Citrus sinensis; type=EST; length=1028bp
ATTCCGGTAGGAACCGGTGTCCGAGATATTCCGGGTCGACCCAGCCGTCC
GCAAAAATAAAAAAAACGAGTACTTGTTTTTCATGCTCATGGCCAATACA
AAGTCGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAAAAACACATA
TCATAGGGCTTTATATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCT
TCTATCGGCTCTCAACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCT
TTTCTAAGTGAGTCCTGTTTTACTTTCATCTGGATTCTCATCGTCAACTG
CAAGTGGACTCCTTTGACCTACATAACTTATCCCCAATGTCTCCTAGAAA
GGTAACAAAACAAATAACGTGAACATTGATAATTTCCGCATCATTTGCAA
TTGTCCTAGTCAATTTGCAAGTTACTACACACACTCACACACCCACATGT
GTACGACTTAACTTGATACACGTACAGCCACCCATAGACATGTTTGCAAC
ACCTGCAGATGCTGATCTCAAGTCCGCCTATCCATCACTGAAAAAACTAT
GATTGATTTGTTAAGAATTGATTAACCTAATTCACAAAAAAGCATGCAAT
ATAACATGAAATGACTGGATCACAACCAAATCTCAACAATCTTGGTGAAA
CTAATAAATACAGCAAGCTATAGAGTTCATTTCGGCATATGTATAAAGTG
TCTACTATGAGCCGCTTATATCACCTGTCACATCATGAAGCTCTCCTATA
CTCGAGCACGGGTAAATATTGCATAGTTGACAAAACTTTTGTAGAAGATA
GCTTTGTATTTTCCCTTACAAGAAACATTCAGATACTTAATACCTTCTGT
TAGTTATCATTTCTAAAAGAAATGGTTAGACACTCCATACAAATATCACA
ATATATATTTCACAATACACATACAAAAAACGTAGTCATAACACCAATCT
CCTACAACATGTCTGTGGACTGTAGGTTTATTGTTCGAACAACACTAAAN
TATAAACCCTTACAACTGTCATATAATG
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