EY679168

Overview
NameEY679168
Unique NameEY679168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1013
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679168 vs. ExPASy Swiss-Prot
Match: FUK_HUMAN (L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.939e-14
Identity = 50/157 (31.85%), Postives = 80/157 (50.96%), Query Frame = -3 
Query:   55 VDHPFQPRTVKVELPVRIDFAGGRSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLIS-----DDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIH--------EKLIESM--GLQIRTWANVPRGSGLGTSSILAAAVVKAL 480
            V+ P   + V  E P R+DF+GG SDTPP + E  G VL +A+ ++   PIG          + ++     D+   ++    L  +      + P  L+K+A +  G++H        E+L+ +   G ++ TW+ +P GSGLGTSSILA   + AL
Sbjct:  698 VELPGPGQWVVAECPARVDFSGGWSDTPPLAYELGGAVLGLAVRVDGRRPIGARARRIPEPELWLAVGPRQDEMTVKIVCRCLADLRDYCQPHAPGALLKAAFICAGIVHVHSELQLSEQLLRTFGGGFELHTWSELPHGSGLGTSSILAGTALAAL 854
The following BLAST results are available for this feature:
BLAST of EY679168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FUK_HUMAN2.939e-1431.85L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-056-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679168 ID=EY679168; Name=EY679168; organism=Citrus sinensis; type=EST; length=1013bp
ACAAACAAGCCGCGCAACATCTTTTTTACTTTGATCTCCATCGGTTATCT
GCAGAAGAGCTTTTACAACAGCAGCTGCTAAGATGCTAGAAGTTCCTAAG
CCACTACCACGGGGGACATTTGCCCACGTCCTGATCTGCAAGCCCATGGA
TTCAATAAGTTTTTCATGAATAACGCCAGTTACTAGCAATGCAGATTTGA
CGAGCCGAAATGGATCATTATGGTCGAAGGGAGTAGCAATGGGGGTGAGG
TCTTCAATATGTAACTGGTTTCCAGCATCATCACTAATCAATACGCCACT
CATTTTTGTTGTCTCTATGATGGTGCCAATCGGAAGAGAACTTTCCAAAC
TTATTGCCACATTGAGAACACAACCAGCACGCTCCAAACTCCAAGGAGGA
GTATCACTCCGACCCCCAGCAAAATCTATCCGAACTGGTAATTCAACCTT
TACAGTTCTTGGTTGGAAAGGATGATCCACAAAGCCATCATCATTTTTAT
TCTGATATGTTGAAAAACCTCTGCCTGAGGGCTCCAGAAGGGATTCTACA
AATAATTGGGGAAAAAAAAAAGTTGCTCGTAAACTATGGGCCCGTAAAAA
ATTTAAGAAAAATTAAAAATTAACCATTAGAAATGGATCACCCCAAACAA
AAAAAAAAAAAAAAAGGGGCGGCCCCCTCCTAAAAGGACCTAAGTCTTAT
CTACGCCGGGGATGGCAACGGTCGAAGCGCCTTCCATATGTGGGCCCCCA
ATAAATCAAATTTCACTGGGGCCCGCCGTTTTCTACGACATCATGGGGAG
GGGGGAAAAACCCCTGGAAGTTTTACCCCAATCTTTATTCCCGGCTTGTG
CGGATAATTATCCCCCACTTTTTTCCCCACGAGTTGGGGTAGAAAATAAA
CTGAAAAAAAGAGCTCCCCACCACACAAACTCTTGCCCCTTTTCCTCTAT
ACATAATAATGTGTCCCCTCCGTGCCCTTGATAAAATGTAGGGGTTAATA
AGCGGTGGTGAAA
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