EY679158

Overview
NameEY679158
Unique NameEY679158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.165e-28
Identity = 80/172 (46.51%), Postives = 98/172 (56.98%), Query Frame = 1
Query:  205 RPATWXXXXXXVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGNLWVDPGAKYHLYTISSGEHTQLAFNGGRGGPSRFYKKRGKGCISKGTQHQGGGIST 720
            RPAT+        WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKI+L+PGDSAGTVTAFYMNS T    R            GQPY+  +  +    +     + NLW DP   YH YTI    H  + F      P R YK      I+  T    G  ST
Sbjct:   31 RPATFVEDFK-AAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATV-RDELDFEFLGNRSGQPYS-VQTNIFAHGKGDREQRVNLWFDPSMDYHTYTI-LWSHKHIVFYVD-DVPIREYKNNEAKNIAYPTSQPMGVYST 197          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.571e-27
Identity = 69/131 (52.67%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  238 VTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLC--KWERAIDNTKGNLWVDPGAKYHLYTISSGEHTQLAF 624
            + WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKI+L+PGDSAGTVTAFYMNS T+   R            GQPY          K +R     + NLW DP   +H Y I S  H ++ F
Sbjct:   40 IAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSV-RDELDFEFLGNRSGQPYTVQTNVFAHGKGDR---EQRVNLWFDPSRDFHEYAI-SWNHLRIVF 165          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  241 TWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGNLWVDPGAKYHLYTI 594
            +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++S+  + +   +      T  GQPY   +  +    +     +  LW DP   YH Y++
Sbjct:   39 SWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRT--GQPYI-LQTNVFTGGKGDREQRIYLWFDPTKGYHSYSV 153          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 1
Query:  238 VTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWE---TEPGQPYAGPEQYLCKWERAIDNTKGN------LWVDPGAKYHLYTI 594
            +TW        E G+ +   LD+ SG GF SK++YLFG++ MKI+LVPG+SAGTVTA+Y++S  E      W    +E      GQPY                 KGN      LW DP A +H YT+
Sbjct:   33 ITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGE-----TWDEIDFEFLGNVTGQPYV-------IHTNVFTGGKGNREMQFYLWFDPTADFHTYTV 148          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.190e-16
Identity = 49/118 (41.53%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  241 TWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGNLWVDPGAKYHLYTI 594
            TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM I+LVPGDSAGTVTAFY++S   + +   +      T  GQPY   +  +    +     +  LW DP  +YH Y++
Sbjct:   38 TWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRT--GQPYI-LQTNVFTGGKGDREQRIYLWFDPTTQYHRYSV 152          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.085e-16
Identity = 47/118 (39.83%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  241 TWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGNLWVDPGAKYHLYTI 594
            TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM I++V GDSAGTVTAFY++S   + +   +      T  GQPY   +  +          + NLW DP   YH Y++
Sbjct:   39 TWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRT--GQPYI-LQTNVFTGGAGNREQRINLWFDPSKDYHSYSV 153          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.056e-15
Identity = 48/124 (38.71%), Postives = 67/124 (54.03%), Query Frame = 1
Query:  241 TWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGN------LWVDPGAKYHLYTI 594
            +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++S+  + +   +      T  GQPY                 KGN      LW DP   YH Y++
Sbjct:   40 SWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRT--GQPY-------ILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSV 154          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15
Identity = 46/118 (38.98%), Postives = 66/118 (55.93%), Query Frame = 1
Query:  241 TWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGNLWVDPGAKYHLYTI 594
            TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM I+LV GDSAGTVTAFY++S   + +   +      T  GQPY   +  +    +     +  LW DP   YH Y++
Sbjct:   39 TWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRT--GQPYI-LQTNVFSGGKGDREQRIYLWFDPTKDYHSYSV 153          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.379e-15
Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1
Query:  241 TWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWETEPGQPYAGPEQYLCKWERAIDNTKGNLWVDPGAKYHLYTI 594
            TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM I++VPGDSAGTVTAFY++S   + +   +      T  GQPY   +  +    +     +  LW DP  +YH Y+I
Sbjct:   40 TWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRT--GQPYI-LQTNVFTGGKGDREQRIYLWFDPTKEYHRYSI 154          
BLAST of EY679158 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 1
Query:  238 VTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIQLVPGDSAGTVTAFYMNSHTEKCERRAWRGGSWE---TEPGQPYAGPEQYLCKWERAIDNTKGN------LWVDPGAKYHLYTI 594
            +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK++LV G+SAGTVTA+Y++S  E      W    +E      GQPY                 KGN      LW DP A +H YT+
Sbjct:   32 ITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGE-----TWDEIDFEFLGNVTGQPYV-------LHTNVFTGGKGNREMQFYLWFDPTADFHTYTV 147          
The following BLAST results are available for this feature:
BLAST of EY679158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
XTH6_ARATH3.165e-2846.51Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.571e-2752.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC3.629e-1638.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH3.629e-1639.06Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN6.190e-1641.53Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH8.085e-1639.83Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.056e-1538.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT1.379e-1538.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.379e-1541.53Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH2.352e-1537.50Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-055-H10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679158 ID=EY679158; Name=EY679158; organism=Citrus sinensis; type=EST; length=932bp
GGGTACCGGGGTCCGGGAATTCCCGGGGTCGACCCCCGCGTCCGGGCATA
CATAACCACAACATATAATTAAAGTTCTCTTTCTAATTAGTAACAGATAA
TATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCA
ATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTT
ACGGCGACCGGCTACTTGGGGGGGGGGAGGGGGGGGAGTCACATGGTCCG
ATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTA
GACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGG
GCGTGTAAGCATGAAGATCCAGCTCGTTCCGGGAGACTCTGCTGGAACTG
TCACTGCATTTTATATGAATTCGCACACCGAAAAATGTGAAAGACGAGCT
TGGAGGGGGGGGTCCTGGGAAACCGAACCGGGTCAGCCCTACGCGGGACC
AGAACAATATCTATGCAAATGGGAAAGGGCGATAGATAACACAAAGGGGA
ACCTCTGGGTGGACCCTGGTGCGAAATATCACCTTTACACTATTTCTTCT
GGGGAACATACCCAGTTGGCCTTCAATGGGGGAAGAGGTGGCCCATCGAG
GTTTTACAAAAAACGGGGGAAGGGCTGCATTTCCAAAGGAACCCAGCACC
AGGGGGGTGGGATTTCGACCCGGAGGGAAACAAAAATGGCGGGGGCGAAA
AGGGGGGGGGCTAAGAAAAAAAAGAGAGGGGAGGAAAAGTCCCCTTTTTT
ATTGCTTGAAGAAAGAAGAGCTATTAAGTTATGGGGGGGTACGCCAGATT
TGCGGGGAAACTGGAGTGACGATGGACGCTGCGAAATCCATATTAGAAGG
TAGGGGTGGGGGGGGAAAAAGAGAAGTTAGCA
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