EY744599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744599 vs. ExPASy Swiss-Prot
Match: LIGA_RAT (Ligatin OS=Rattus norvegicus GN=Lgtn PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.315e-24 Identity = 77/231 (33.33%), Postives = 111/231 (48.05%), Query Frame = 2 Query: 29 AVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAAD--------SSNDQKNGEEGIIDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKRLSKWLQAKSSAGLISVKK 697 A+ + GN AP+AVG MS+ + L +GL+GK + + H Y+D LW S + S P L DP +DSCE AD S + + E G + A+ +PNS + +QD DG ++ E +D L++C L AL + VK DLP+ STL +H+ C P G LDIKKSS+K+LSK+LQ ++ VK+ Sbjct: 134 AIALVGNRAPVAVGVAAMSTAQMLASGLKGKGISVLHTYQDHLWRSGDKSSPPAIAPL------DP--------TDSCEEKADLGLHGNLRSLSLEGEEENGQVPNPEASDDPNSRALSQDSVDGKPLQ-----------------------------EQMDELLEQCFLHALKSRVKKADLPLLTSTLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQHMQQEQIVQVKE 321
BLAST of EY744599 vs. ExPASy Swiss-Prot
Match: LIGA_MOUSE (Ligatin OS=Mus musculus GN=Lgtn PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 3.582e-22 Identity = 70/223 (31.39%), Postives = 104/223 (46.64%), Query Frame = 2 Query: 29 AVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKRLSKWLQAKSSAGLISVKK 697 A+ + GN AP+A+G MS+ + L +GL+GK + + H Y+D LW S + S P L DP +V +G S E G + A+ + +S + +QD DG ++ E +D L +C L AL + VK DLP+ STL +H+ C P G LDIKKSS+K+LSK+LQ ++ VK+ Sbjct: 134 AIALVGNRAPVAIGVAAMSTAQMLASGLKGKGVSVLHTYQDHLWRSGDKSSPPAIAPL------DPTDSCEEKVHLGLQGNLKSLTLDGEEENGQVPLREASEDTSSRAPSQDSLDGKPLQ-----------------------------EQMDDLLLRCFLHALKSRVKKADLPLLTSTLLGSHMFSCCPEGQQLDIKKSSYKKLSKFLQHMQQEQIVQVKE 321
BLAST of EY744599 vs. ExPASy Swiss-Prot
Match: LIGA_PONAB (Ligatin OS=Pongo abelii GN=LGTN PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 5.172e-21 Identity = 68/225 (30.22%), Postives = 103/225 (45.78%), Query Frame = 2 Query: 29 AVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTT--EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKRLSKWLQAKSSAGLISVKK 697 A+ + GN AP+A+G MS+ E L +GL+G+ + H Y+D LW S S P+ P L ++ +S+ E+G + D+ + + + V Q D + E+ N++ T E +D L +C L AL VK DLP+ ST +H+ C P G LDIKKSS+K+LSK+LQ +I VK+ Sbjct: 134 AISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSGNKSSPPSIA---------PLALDSADLSE---------------EKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSEAPEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLASTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKE 334
BLAST of EY744599 vs. ExPASy Swiss-Prot
Match: LIGA_HUMAN (Ligatin OS=Homo sapiens GN=LGTN PE=1 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 8.823e-21 Identity = 68/225 (30.22%), Postives = 103/225 (45.78%), Query Frame = 2 Query: 29 AVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTT--EDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKRLSKWLQAKSSAGLISVKK 697 A+ + GN AP+A+G MS+ E L +GL+G+ + H Y+D LW S S P+ P L ++ +S+ E+G + D+ + + + V Q D + E+ N++ T E +D L +C L AL VK DLP+ ST +H+ C P G LDIKKSS+K+LSK+LQ +I VK+ Sbjct: 134 AISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLWRSGNKSSPPSIA---------PLALDSADLSE---------------EKGSVQMDSTLQGDMRHMTLEGEEENGEVHQAREDKSLSEAPEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHALKCRVKKADLPLLTSTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKE 334
BLAST of EY744599 vs. ExPASy Swiss-Prot
Match: LIGA_BOVIN (Ligatin OS=Bos taurus GN=LGTN PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.379e-20 Identity = 73/223 (32.74%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 29 AVKVPGNPAPIAVGSTTMSSTEALKAGLRGKALRITHYYRDLLWGSVEGHSVPNAGFLEDVVVEDPAFLSTSQVSDSCEGAADSSNDQKNGEEGIIDADNANSEPNSTSATQDDFDGNIVEQVAADVGDLKLTENVDAGETNEEHHVLTTEDVDAYLDKCLLQALHTTVKDKDLPMPGSTLWSNHILPCRPSGITLDIKKSSHKRLSKWLQAKSSAGLISVKK 697 AV + GN AP+AVG MS+ E L +GL+G+ + H Y+D LW S + S P+ L +P LS + + A + Q EE + E + + AT+D G + D D K + E +D L C L AL +V+ DLP+ STL +H+ C P G LDIKKSS+K+LSK+LQ +I V++ Sbjct: 134 AVALVGNRAPVAVGVAAMSTAEMLASGLKGRGFCVLHSYQDHLWRSGDKSSPPSIAPL----ALNPPDLSEGKGCVKADTALQGAMRQLTLEE---EVQQRCEEKSPSEATEDPGPGGL----HVDPMDSKTLQ----------------EQMDELLQTCFLHALKCSVRKADLPLLTSTLLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQHMQQEQIIQVQE 329 The following BLAST results are available for this feature:
BLAST of EY744599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744599 ID=EY744599; Name=EY744599; organism=Citrus sinensis; type=EST; length=964bpback to top |