EY744593

Overview
NameEY744593
Unique NameEY744593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744593_ssr141 microsatellite EY744593_ssr141:141..152. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY744593 vs. ExPASy Swiss-Prot
Match: K502_ACTDE (Fruit protein pKIWI502 OS=Actinidia deliciosa GN=pKIWI502 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.083e-15
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 1 
Query:    1 PRVRALALSPSPSLP-HAHVSQTFP---PMSILRRISLLNLKPQRRHLATLAAA-----AVRQDTTVWTPAPLVEISPAA-ESLFHISIDISDAPDIGSSHTRAGQYLQLRVADV-----GKPTFLAVASPPSFASANGASEFLVKNVAGLDRESFC 426
            P +   +LS  PSL  H+ +S   P   P++ LR  +L      R  L ++A+A     A+RQDT +WTP P+  + PAA ESLF + +D+S +PD+  +    GQY+Q+R+ +       +P +  +ASPPS    N   EFL+++V G   E  C
Sbjct:    8 PSLSRPSLSRHPSLTLHSSLSHAPPHHRPVAFLRHPTLRYHHHGR--LLSVASAILQDTAIRQDTYIWTPVPISRVLPAAAESLFKVIVDLSRSPDLVYNFVSPGQYVQIRIPEAIVNPPPRPAYFYIASPPSLVKKNLEFEFLIRSVPGTTSEVLC 162
The following BLAST results are available for this feature:
BLAST of EY744593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
K502_ACTDE1.083e-1535.67Fruit protein pKIWI502 OS=Actinidia deliciosa GN=p... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-C12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744593 ID=EY744593; Name=EY744593; organism=Citrus sinensis; type=EST; length=946bp
CCACGCGTCCGGGCCCTTGCTCTCTCTCCATCACCCTCCTTGCCCCATGC
ACACGTTAGCCAAACCTTCCCTCCCATGTCTATCCTACGCCGCATTTCAT
TACTTAACCTAAAACCCCAACGACGCCACCTCGCCACCCTCGCCGCCGCC
GCCGTACGCCAAGACACCACTGTCTGGACACCCGCCCCGCTCGTCGAGAT
CTCTCCCGCTGCTGAGTCGCTCTTCCACATATCTATCGACATCTCCGACG
CACCCGACATCGGGTCTTCCCACACACGTGCGGGTCAATACCTTCAGCTC
CGTGTTGCTGACGTGGGAAAGCCTACTTTCCTTGCTGTTGCTTCTCCGCC
GTCTTTTGCTTCTGCGAATGGCGCATCTGAATTCCTTGTGAAGAACGTGG
CTGGGCTCGACAGGGAGAGCTTTTGTGTAGACTAAAGAAGCGCAATGAGG
CGCAAGACACGTAAAGCGAAGAGAGAACAAAATCGACCCCCCACACAGCA
GAGAAAGAACATGAAGGAGAAGGGGAGGAAAGAAAACACAAAAAAGAAAG
ACAGGAAAGAACAGCCAGATCAAACACCAGAGCCGAAGACCAGCCAGCCC
CAGACGCGGACAAGACAACGGCCAGGCCAGGAAGCGAAGAGAGACGACAG
AGGGCGAAGGAGGGAAGCAGACAGACGACACAAGGCGGCGGCGGAGAAAA
AAACACCAAGCACAACACCGACAGGTAGAGAGACAAGGGAACGGGCGAAG
AGAACGAGTGAGAGAGAAAAAAGAGAGATCGAAAGCAGACAAACGACGAA
CACAGAGGCACGGGAGCGCGGCGAGGAGACACAAGGCAATAAAGGAACAG
AGAGCGGGCCAGGAGACAAACGACACAGGAAGAGCAAGAATAGCAAACAC
AAGAAGAGAGAAACGGACGGACAAAAGAAAGAAGAACTGGGGAGGG
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