EY744584

Overview
NameEY744584
Unique NameEY744584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744584 vs. ExPASy Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 1.019e-65
Identity = 111/156 (71.15%), Postives = 130/156 (83.33%), Query Frame = 1 
Query:  103 MSGAGKKIADVAFKAGRTIDWEGMAKMLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKQAYESIEVPKYVDKVTPEYKSKFDALLVELKEAXXXXXXXXXXXXXXIAEVPELKEKISTMTAEEYFEKPSGTQKE 570
            MSGAGKKIADVAFKA RTIDW+GMAK+LV+DEAR+EF+ LRRAFDEVN+ LQTKFSQEPEPIDW+YYRKGIG+ +VD YK+AY+SIE+PKYVDKVTPEYK KFDALLVELKEA              IA+V E+ +K+STMTA+EYFEK    +K+
Sbjct:    1 MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPEPIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKESERLEKEIADVQEISKKLSTMTADEYFEKHPELKKK 156

HSP 2 Score: 45.4394 bits (106), Expect = 1.019e-65
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 2 
Query:  545 KSHPELKKKFDDEIRNDYWGY 607
            + HPELKKKFDDEIRND WGY
Sbjct:  148 EKHPELKKKFDDEIRNDNWGY 168
The following BLAST results are available for this feature:
BLAST of EY744584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATP5H_ARATH1.019e-6571.15ATP synthase subunit d, mitochondrial OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-002-C03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744584 ID=EY744584; Name=EY744584; organism=Citrus sinensis; type=EST; length=961bp
TTGTTTTGATACCCTCAGAAAACACAAAAGCTTGTTGTTTCGGAGCTGAG
AAAATCAAAAAATTAAGAGAAAAGAAAAAGGGAAAATCAGTCGAGAGAGA
AAATGAGCGGAGCTGGCAAGAAAATAGCTGACGTCGCATTCAAGGCCGGA
AGGACCATAGATTGGGAAGGGATGGCGAAGATGCTGGTCTCCGATGAGGC
GCGCAAGGAGTTCGCCACTCTCCGTCGCGCTTTCGACGAAGTCAACTCCA
CTCTTCAGACCAAGTTCAGCCAGGAACCTGAACCTATTGACTGGGAGTAT
TACAGAAAAGGAATTGGCTCTCGCTTGGTGGACATGTACAAACAGGCTTA
TGAAAGCATAGAGGTCCCAAAGTATGTAGACAAAGTCACCCCTGAATACA
AATCTAAGTTTGATGCTTTGCTGGTGGAATTGAAAGAAGCAGAAGGGAAA
TCTCTTAAGGAGTCCGAGCGTTTGGAGAAAGAAATAGCTGAGGTTCCAGA
ACTGAAGGAAAAGATCAGCACCATGACCGCTGAGGAATACTTTGAAAAGC
CATCCGGAACTCAAAAAGAAGTTCGATGATGAAATCAGGAATGACTACTG
GGGCTATTGATCACCCTTTTGCTCATTTACCACCTGCATTTCCTAAGCTC
GGCAAAAATTTCTGAAGTTGCCCCGGTTTTCCCGGCTTGGTAAATAATAA
GGATATTCCAGATTGTTTTTGCCAAAAACCCGGGTGCCCCTTGGTTTTAA
AAATTTTAGCTTTTGATCTACCTTTTATGCTTAAACATTTCTGTTTTTTG
GGGGATTGGGTTCCCCTTTTTACCTTTTAGAAGCGCAAAAAACAAAAAAA
GAAAGAAGAAAACAACACACAACAAACCCAAAAAAGAAATATGGGGGCGG
GGCGCACTCAGAGAAGAACGCCAACGCTTTTAAAAATGCGGGGGTGGTGG
GGGGAACAAAA
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