EY744541

Overview
NameEY744541
Unique NameEY744541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744541 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 7.505e-50
Identity = 109/223 (48.88%), Postives = 143/223 (64.13%), Query Frame = 2
Query:   77 NQRWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVGSVVDIASHIWSYQREP*TLFPRILACQWASDNI*RPFLASLGLG-PDSFYLHLFSTEHRLFSRKPKGRNSQCE 742
            +QRW+++  T LVTGGTKG+GH             HTC+RNE +L+EC+  W+ KGF+VTGSVCD S R EREKL+  VSS+F GKL+ILINN+G    K T++YTAEDFSF ++TN ESAY+L QLAHPLLKASG  +I+ MSS+ GV S       I+S  +       R LAC+WASD I    +A   +  P +  ++    +  + SRKP GR  + E
Sbjct:    7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA--SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPE 227          
BLAST of EY744541 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.084e-48
Identity = 97/183 (53.01%), Postives = 128/183 (69.95%), Query Frame = 2
Query:   77 NQRWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVGSVVDIASHIWSYQREP*TLFPRILACQWASDNI 625
            ++RW+++GMTALVTGGT+G+G+             +TCSR++ DL EC+  W+ KGFKV+G VCDVSS  +R+ L+  V+S F+GKLNILINN GTTI K    +TAED+S +M TNFE++YNLCQLAHPLLKASG ASIV  SS  GV +V    S I++  +       + LAC+WA D+I
Sbjct:   10 DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVP--LSSIYAASKGAINQVTKSLACEWAKDSI 190          
BLAST of EY744541 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.210e-43
Identity = 81/181 (44.75%), Postives = 121/181 (66.85%), Query Frame = 2
Query:   83 RWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVGSVVDIASHIWSYQREP*TLFPRILACQWASDNI 625
            RW+++G TALVTGG+KG+G+             +TCSRNE +L EC+  W+ KG  V GSVCD+ SR ER+KL+  V+ +FDGKLNIL+NN G  I K   ++T +D++ +M TNFE+AY+L Q+A+PLLKAS   +++ +SS+ G  ++  ++  ++S  +       + LAC+WA DNI
Sbjct:   16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVS--LYSASKGAINQMTKSLACEWAKDNI 194          
BLAST of EY744541 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.876e-41
Identity = 84/181 (46.41%), Postives = 119/181 (65.75%), Query Frame = 2
Query:   83 RWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVGSVVDIASHIWSYQREP*TLFPRILACQWASDNI 625
            RW ++G TALVTGG++G+G+             +TCSRN+ +L++C+  W++KGFKV  SVCD+SSR ER++L+N V++ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +SSV G  +V   A  ++   +       R LA +WA DNI
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEA--VYGATKGAMDQLTRCLAFEWAKDNI 182          
BLAST of EY744541 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.391e-40
Identity = 82/181 (45.30%), Postives = 115/181 (63.54%), Query Frame = 2
Query:   83 RWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVGSVVDIASHIWSYQREP*TLFPRILACQWASDNI 625
            RW ++G TALVTGG++G+G+             +TCSRN+ +L EC+  W++KGF V  SVCD+SSR ERE+ +  VS+ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +SS+ G  ++   A  ++   +       R LA +WA DNI
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEA--VYGATKGAMDQLTRCLAFEWAKDNI 182          
The following BLAST results are available for this feature:
BLAST of EY744541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TRNH1_ARATH7.505e-5048.88Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRNH_DATST1.084e-4853.01Tropinone reductase homolog OS=Datura stramonium P... [more]
TRN1_DATST5.210e-4344.75Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_DATST4.876e-4146.41Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
TRN2_HYONI5.391e-4045.30Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-G03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744541 ID=EY744541; Name=EY744541; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGGTTCACTTTAACTTTTATCACCTTTATTTCGAATGGCGC
CTCCGACGAACGGCAATGGCAGGCTCAATCAGAGATGGACTGTCCAGGGA
ATGACTGCGCTTGTAACTGGTGGAACCAAAGGACTAGGTCATGCTGTAGT
GGAGGAACTGGCTGAGCTTGGTGCCGCTGTGCATACATGCTCTAGGAATG
AAGCAGATCTTAGTGAATGCATACGTGACTGGAAAACTAAAGGCTTCAAA
GTCACCGGTTCAGTGTGCGATGTATCATCTCGAATTGAACGGGAAAAGCT
TATAAACCAAGTCTCCTCTCTGTTCGATGGAAAACTTAACATTCTCATAA
ACAACGTCGGGACGACTATAAGAAAGGCGACTGTGGAGTACACAGCAGAA
GATTTCTCGTTTCTCATGGCTACCAATTTTGAGTCTGCTTACAATCTGTG
CCAACTTGCACATCCTCTTTTGAAAGCTTCGGGGGCAGCAAGTATTGTTC
TAATGTCTTCTGTTTGTGGGGTGGGGTCCGTTGTTGACATTGCATCCCAT
ATATGGAGCTACCAAAGGGAACCGTGAACCCTCTTTCCAAGGATTTTGGC
ATGCCAGTGGGCCTCAGATAATATTTAGCGACCATTTCTGGCTTCCCTTG
GGCTTGGCCCCGACTCCTTTTACTTGCATCTTTTCTCCACTGAACACCGC
CTTTTCTCAAGGAAGCCCAAGGGGCGAAACTCCCAATGCGAACCCTCCGG
GAAACCCGAAAGGAACAATCCCCCCTATCCTAAGCAATTTTATTGGACGC
GCGACCAGCCTCCCTATATCCAACTGGCACCAAAACATTTTTCCCCCCAA
AGGAGAGGAATACACCAAACACATAGGACCTCTCCTCTCCCCCCCTAAAC
CCACAGACCCTGCTTTATGTACCCCCCCCTTACTCACACGCAAAGACGCC
CCCCAAAAAGCTTCGGCCAACAACTCATACACGGCGGCCTCACCGCTCCC
ACCGCACCCGGGGGGCCCGCCAC
back to top