EY744514

Overview
NameEY744514
Unique NameEY744514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.936e-67
Identity = 116/155 (74.84%), Postives = 136/155 (87.74%), Query Frame = 2
Query:    8 SAADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGFPAPI 472
            + ADR+LTVS+GYSWEITT EGGYGLHE+LSSR+SVLNGITNGID+ +WNPS+DEHIASHYSI+DLSGKVQCK  LQKELGLPIRPDCPLIGFIGRLD+QKG+D+I  A PE++ +DVQ VMLGSG+ Q+E WM  TE  +KDK+R WVGF  P+
Sbjct:  360 AVADRILTVSQGYSWEITTPEGGYGLHELLSSRQSVLNGITNGIDVNDWNPSTDEHIASHYSINDLSGKVQCKTDLQKELGLPIRPDCPLIGFIGRLDYQKGVDIILSAIPELMQNDVQVVMLGSGEKQYEDWMRHTENLFKDKFRAWVGFNVPV 514          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY1_ARATH (Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.058e-67
Identity = 111/153 (72.55%), Postives = 138/153 (90.20%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGFPAPI 472
            +DR++TVS+GY+WEITTVEGGYGL ++LSSRKSV+NGITNGI++ EWNPS+DEHI  HYS DD+S K++CK+ALQKELGLPIRP+CP+IGFIGRLD+QKGIDLI+ A P+++ DD+QFVMLGSGDP++ESWM   E TY+DK+RGWVGF  PI
Sbjct:  373 SDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPI 525          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.467e-64
Identity = 110/153 (71.90%), Postives = 133/153 (86.93%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGFPAPI 472
            ADR++TVS+GYSWE+TT EGG GL+E+LSSRKSVLNGI NGIDI +WNPS+D+ +  HYS+DDLSGK +CK  LQKELGLPIRPD PLIGFIGRLD+QKGIDLI+LA P+++ D++QFVMLGSGDP FE WM  TE+ Y+DK+RGWVGF  P+
Sbjct:  363 ADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPV 515          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 7.177e-64
Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGFPAPI 472
            ADR++TVS+GYSWE+TT EGG GL+E+LSSRKSVLNGI NGIDI +WNPS+D+ +  HYS+DDLSGK +CK  LQ+ELGLPIRPD PLIGFIGRLD+QKGIDLI+LA P+++ D++QFVMLGSGDP FE WM  TE+ Y+DK+RGWVGF  P+
Sbjct:  363 ADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPV 515          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 9.374e-64
Identity = 109/153 (71.24%), Postives = 133/153 (86.93%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGFPAPI 472
            ADR++TVS+GYSWE+TT EGG GL+E+LSSRKSVLNGI NGIDI +WNP++D+ +  HYS+DDLSGK +CK  LQKELGLP+R D PLIGFIGRLD+QKGIDLI++A PE++ +DVQFVMLGSGDP FE WM  TE++YKDK+RGWVGF  P+
Sbjct:  369 ADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPTTDKCLPHHYSVDDLSGKAKCKAELQKELGLPVREDVPLIGFIGRLDYQKGIDLIKMAIPELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFSVPV 521          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 2.400e-43
Identity = 88/154 (57.14%), Postives = 107/154 (69.48%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL-SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGF 460
            ADR++TVS GYSWE+ T +GG+GLH+I++     L GI NGID  EWNP  D H+ S    +YS+D L +GK QCK ALQKELGLP+R D PLIGFIGRLD QKG+DLI  A P ++  DVQ VMLG+G    E  +   E  + DK RGWVGF
Sbjct:  491 ADRVVTVSHGYSWELKTSQGGWGLHQIINENDWKLQGIVNGIDTKEWNPELDVHLQSDGYMNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRRDLEQMLRQFECQHNDKIRGWVGF 644          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.984e-43
Identity = 87/154 (56.49%), Postives = 108/154 (70.13%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL-SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGF 460
            ADR +TVS GY WEI T++GG+GLHEI++     L GI NGID+ EWNP  DEH+ S    +Y+ + L +GK QCK ALQ++LGL +R D PLIGFIGRLDHQKG+D+I  A P I   DVQ VMLG+G P  E  +   E+ + DK RGWVGF
Sbjct:  418 ADRAVTVSHGYLWEIKTMDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGF 571          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.654e-42
Identity = 86/155 (55.48%), Postives = 107/155 (69.03%), Query Frame = 2
Query:   11 AADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL-SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGF 460
            AADRLLTVS GY+WE+ T EGG+GLH I++       GI NGID T+WNP  D H+ S    +YS++ + +GK QCK ALQKELGLP+R D P+I FIGRLDHQKG+DLI  A P I   DVQ +MLG+G    E  +   E+ + D+ RGWVGF
Sbjct:  472 AADRLLTVSHGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGF 626          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.534e-40
Identity = 80/154 (51.95%), Postives = 106/154 (68.83%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL-SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGF 460
            ADR++TVS GY+WE+ T EGG+GLH I++       GI NG+D  +WNP  D ++ S    +Y++  L +GK QCK ALQ+ELGLP+R D P+I FIGRLDHQKG+DLI  A P +++ DVQ VMLG+G    E  + + EA + DK R WVGF
Sbjct:  476 ADRIVTVSHGYAWELKTSEGGWGLHNIINESDWKFRGIVNGVDTKDWNPQFDAYLTSDGYTNYNLKTLQTGKRQCKAALQRELGLPVREDVPIISFIGRLDHQKGVDLIAEAIPWMMSHDVQLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGF 629          
BLAST of EY744514 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.439e-40
Identity = 84/154 (54.55%), Postives = 103/154 (66.88%), Query Frame = 2
Query:   14 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIAS----HYSIDDL-SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDHQKGIDLIRLAAPEILADDVQFVMLGSGDPQFESWMTDTEATYKDKYRGWVGF 460
            ADR++TVS GY WE+ T EGG+GLH+I+      +NGI NGID  EWNP  D H+ S    +Y++  L SGK +CK ALQ+ELGL +R D PLIGFIGRLD QKG+D+I  A P I   DVQ V+LGSG    E  +   EA +  K RGWVGF
Sbjct:  534 ADRVVTVSPGYLWELKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSGKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGF 687          
The following BLAST results are available for this feature:
BLAST of EY744514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
SSY1_SOLTU6.936e-6774.84Soluble starch synthase 1, chloroplastic/amyloplas... [more]
SSY1_ARATH9.058e-6772.55Soluble starch synthase, chloroplastic/amyloplasti... [more]
SSY1_ORYSJ2.467e-6471.90Soluble starch synthase 1, chloroplastic/amyloplas... [more]
SSY1_ORYSI7.177e-6471.24Soluble starch synthase 1, chloroplastic/amyloplas... [more]
SSY1_WHEAT9.374e-6471.24Starch synthase 1, chloroplastic/amyloplastic OS=T... [more]
SSY2_SOLTU2.400e-4357.14Granule-bound starch synthase 2, chloroplastic/amy... [more]
SSY22_ORYSJ6.984e-4356.49Soluble starch synthase 2-2, chloroplastic/amylopl... [more]
SSY21_ORYSJ2.654e-4255.48Soluble starch synthase 2-1, chloroplastic/amylopl... [more]
SSG2_PEA5.534e-4051.95Granule-bound starch synthase 2, chloroplastic/amy... [more]
SSY23_ORYSI9.439e-4054.55Soluble starch synthase 2-3, chloroplastic/amylopl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744514 ID=EY744514; Name=EY744514; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCAGCTGATCGATTACTTACAGTGAGCAAGGGTTATTCAT
GGGAAATAACAACTGTTGAAGGTGGATATGGCTTACATGAGATATTAAGC
AGTCGAAAGAGTGTTCTGAATGGAATCACAAATGGCATTGATATAACCGA
GTGGAATCCATCTTCAGATGAGCACATTGCTTCCCATTATTCAATTGACG
ATCTCTCTGGAAAGGTTCAGTGCAAGATTGCTTTGCAGAAGGAACTTGGC
CTTCCCATTCGGCCTGATTGTCCCCTGATTGGATTTATTGGAAGACTGGA
TCACCAGAAAGGCATTGACCTGATTCGCTTGGCAGCCCCAGAGATCTTGG
CAGACGATGTTCAATTTGTCATGCTTGGTTCTGGGGATCCTCAATTTGAG
AGCTGGATGACAGACACGGAGGCAACTTACAAAGACAAGTATCGTGGTTG
GGTTGGATTCCCTGCGCCAATTTATCGAACCGATCCATGCTGGGCTACTC
ACAATTAGACTTCCCAGAACATGTGCCTAGGAGCGGCGAACCCGCGAATC
GAAAGCATAGAAAGGACACCAACACCACCACCAGCACCCGCCGTCCCAGC
CCCCACAGCGGCGGGACCTCGCACCACAACCCAGTACTGGCAAAAAGCAC
AAAGCCCAGCCCCCTCAACCCCAGCGAGACGCAAACGGGCCTGCCAAGCA
CACTGCACAAAACCCACGGGAGGAATCGCCACCACAGACCGCTAGCTCGG
ACAAAAAGCGGGAGTCAACCAGCGACCATAACGAGCAGACACAGTCAACG
CGACGGACCCAACACATCCAACAAGCCAAGACCACACCCCAGCCGCACCA
ACGAGCATTACCCACGCG
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