EY744498

Overview
NameEY744498
Unique NameEY744498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1032
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744498 vs. ExPASy Swiss-Prot
Match: ALG13_HUMAN (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo sapiens GN=ALG13 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.470e-16
Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = 2
Query:    2 TSFDALVKVADTLEVKQELTRRGYTHLLIQMGRGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELP*ELADRKHL-YCAHPSIP 367
            TSFD L+      +  Q++   GY  L++Q+GRGT +P     E     +D + +             VISHAG+GS  ETL  GKPL+VV+NE LM+NHQ EL  +L    HL YC   ++P
Sbjct:   11 TSFDDLIACVSAPDSLQKIESLGYNRLILQIGRGTVVPEPFSTES--FTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINEKLMNNHQLELAKQLHKEGHLFYCTCSTLP 131          
BLAST of EY744498 vs. ExPASy Swiss-Prot
Match: ALG13_MOUSE (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus musculus GN=Alg13 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.226e-16
Identity = 52/123 (42.28%), Postives = 67/123 (54.47%), Query Frame = 2
Query:    2 TSFDALVKVADTLEVKQELTRRGYTHLLIQMGRGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELP*ELADRKHL-YCAHPSIP 367
            TSFD LV      +  Q L   GY HL++Q+GRGT +P     E     +D + +             VISHAG+GS  E+L  GKPL+VVVNE LM+NHQ EL  +L    HL YC   ++P
Sbjct:   11 TSFDELVARVVANDCVQILESLGYNHLVLQVGRGTVVPKPFRTES--FTLDVYRYKDSLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLHKEGHLFYCTCSTLP 131          
BLAST of EY744498 vs. ExPASy Swiss-Prot
Match: ALG13_RAT (UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus GN=Alg13 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.502e-16
Identity = 52/123 (42.28%), Postives = 66/123 (53.66%), Query Frame = 2
Query:    2 TSFDALVKVADTLEVKQELTRRGYTHLLIQMGRGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELP*ELADRKHL-YCAHPSIP 367
            TSFD LV      +  Q L   GY HL++Q+GRGT +P     E     +D + +             VISHAG+GS  E+L  GKPL+VVVNE LM+NHQ EL  +L    HL YC    +P
Sbjct:   11 TSFDDLVARVVANDTVQILKSLGYNHLVLQIGRGTVVPEPFSTEP--FTLDVYRYKESLKEDLQQADLVISHAGAGSCLESLEKGKPLVVVVNEKLMNNHQFELAKQLHKEGHLFYCTCSMLP 131          
BLAST of EY744498 vs. ExPASy Swiss-Prot
Match: ALG13_YARLI (UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica GN=ALG13 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.164e-12
Identity = 39/112 (34.82%), Postives = 65/112 (58.04%), Query Frame = 2
Query:    8 FDALVKVADTLEVKQELTRRGYTHLLIQMGRGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELP*ELADRKHL 343
            F+AL+++  + E    L++ G++ + +Q GRG         ++G++++  F +             VISHAG+GS+ + LR+GK  +VVVN  LMDNHQ E+  EL  ++HL
Sbjct:   40 FEALIELVLSHESITTLSQLGFSKMRVQYGRGNRHIFTKHHKEGVMSITGFEYTDDLAGEMSRAHLVISHAGTGSVLDALRIGKHPVVVVNSKLMDNHQIEIAEELFRKRHL 151          
BLAST of EY744498 vs. ExPASy Swiss-Prot
Match: ALG13_SCHPO (UDP-N-acetylglucosamine transferase subunit alg13 OS=Schizosaccharomyces pombe GN=alg13 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.222e-12
Identity = 44/114 (38.60%), Postives = 59/114 (51.75%), Query Frame = 2
Query:    2 TSFDALVKVADTLEVKQELTRRGYTHLLIQMGRGTYLPAESIGEDGLLAVDCFTFXXXXXXXXXXXXXVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQSELP*ELADRKHL 343
            T FD L++     E +  L + G   L++Q G+G     +     GL  +  F +             VISHAG+GSI +TLR GK L+VV NE LMDNHQ EL  +LA   +L
Sbjct:   10 TQFDDLIRAVLKPEFQHCLVKHGINQLIVQYGKGKQAFGDPKSVAGLTILG-FDYAPEIESYIHDASIVISHAGAGSILQTLRSGKRLLVVPNESLMDNHQVELATKLASMNYL 122          
The following BLAST results are available for this feature:
BLAST of EY744498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ALG13_HUMAN2.470e-1639.84UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]
ALG13_MOUSE3.226e-1642.28UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]
ALG13_RAT5.502e-1642.28UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]
ALG13_YARLI2.164e-1234.82UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]
ALG13_SCHPO8.222e-1238.60UDP-N-acetylglucosamine transferase subunit alg13 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-C07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744498 ID=EY744498; Name=EY744498; organism=Citrus sinensis; type=EST; length=1032bp
CACATCCTTTGATGCCCTTGTGAAAGTGGCGGATACTTTGGAAGTAAAAC
AAGAGCTGACAAGAAGAGGATATACTCATCTTCTCATTCAAATGGGTCGA
GGAACCTATTTACCTGCTGAGTCCATTGGAGAGGATGGCCTCTTGGCTGT
CGACTGTTTCACCTTTTCGTCAAGTATTGCAGACCATCTTAGCTCTGCAT
CTCTTGTAATCAGTCATGCTGGGTCAGGGAGCATATTCGAGACCTTACGG
CTTGGTAAACCTTTGATAGTGGTGGTGAATGAAGACTTGATGGACAATCA
TCAAAGTGAGCTACCATAAGAACTAGCAGATAGGAAGCATTTATATTGTG
CTCATCCCTCCATCCCTTCATCAGGTTATAGCGGGTATGGATTTGAAATC
TCTCCTACCATACCAACCCGGTGATGCCACACCAGCTTGCCAGGCTTATA
CCCAGATTTCTAGGTTTCCCTGGATGATTGATTTAAGTTCACAGAATTAA
TGTTGATAACTGAAACAACTAAGGAAGGTGGAATACTTCATTTTTTTCTT
TTTTTCCCTCTAGTCAACTATAACCCTAAAATTTATGTCCTTCAGGAATA
CCCAGCAGTTCGTCCGGAAACTTTCAATTATCCCAAAAACATTATTTTAA
TTGGACTGGAATGGTCCCCCCTTGGAATTGATACGAAAATTTTCCTCCCA
CTTACAATTCTTTTTATTAACTTGTTTTGGCGAACCCCAATTTGAGGCAT
TCCATTAAAATGGGCAAAAACTCTAAAAACATAACCAAAAAAAAAAAACA
AAAAAACGACGGGGGGGCCCCCCTCAAACGGAATCACCAATCCTTCACAC
TCCCCCGGCGTTTGGGCAACCCACCTAAAGTTATTATCAAAGAGGGGAAA
GCAACAAAAATCCATCATCCCCAGGGGCGACCCCTCTTCTTTTAAGACAC
GAACTTGCGGTACAAGGAGGGGAAATAACCCCCAGAGGCCGACTCATAAC
ACTCACTTCTCTTTTAATATTCGTCCTCCATT
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