EY744471

Overview
NameEY744471
Unique NameEY744471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744471 vs. ExPASy Swiss-Prot
Match: APX4_SOLLC (Putative L-ascorbate peroxidase, chloroplastic OS=Solanum lycopersicum GN=CLEB3J9 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.481e-12
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 3 
Query:   84 CHKIETLIIVEAGFGRRDILKCLGATIGMEIIS-NS**VEMARAADLIQRRQRSEFISNIKETLQTALQGNPNLIP 308
            C K  + +  E  F RRDIL+ +GA +GM++I+ +S  +E+A AADLIQRRQRS+F S IK TL  A++ NP++IP
Sbjct:   35 CCKFRSELNNEDRFHRRDILQSVGAAVGMDLIARSSAFIEVANAADLIQRRQRSDFQSKIKLTLYDAIKANPDIIP 110

HSP 2 Score: 22.3274 bits (46), Expect = 2.481e-12
Identity = 16/42 (38.10%), Postives = 24/42 (57.14%), Query Frame = 1 
Query:  340 MTYDKLAGYKIWGP*-CIQYAHLTHSPNPQNNGISAANNLLQ 462
            +TYDK    K  GP   I+++  +    P+N G+ AA NLL+
Sbjct:  121 ITYDKAT--KTGGPNGSIRFS--SEISRPENKGLDAALNLLE 158
[Close]
BLAST of EY744471 vs. ExPASy Swiss-Prot
Match: APX4_ARATH (Probable L-ascorbate peroxidase 4, chloroplastic OS=Arabidopsis thaliana GN=APX4 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 4.099e-11
Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 3 
Query:   42 TVATICSALAGAIRCHKIETLIIVEA-GFGRRDILKCLGATIGMEIISNS**--VEMARAADLIQRRQRSEFISNIKETLQTALQGNPNLIP 308
            T  +  S  +  IRC KIE  +  E+  F RRD+LK  G  +GME+I N     V  A+AADL QRRQRSEF S IK  L T ++  P L+P
Sbjct:   23 TTLSSSSHRSAVIRCSKIEPQVSGESLAFHRRDVLKLAGTAVGMELIGNGFINNVGDAKAADLNQRRQRSEFQSKIKILLSTTIKAKPELVP 114
The following BLAST results are available for this feature:
BLAST of EY744471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
APX4_SOLLC2.481e-1251.32Putative L-ascorbate peroxidase, chloroplastic OS=... [more]
APX4_ARATH4.099e-1146.74Probable L-ascorbate peroxidase 4, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-009-A02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744471 ID=EY744471; Name=EY744471; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGGTTCCTCACCCATCTCGCAACGCTTTCTCTACTGTGGCC
ACCATATGCTCCGCTCTTGCTGGTGCTATACGTTGTCATAAAATTGAGAC
TCTTATTATTGTTGAAGCTGGTTTTGGTAGAAGGGATATTCTGAAATGCC
TTGGTGCGACCATTGGAATGGAAATAATATCAAACTCATGATAAGTTGAA
ATGGCACGTGCTGCTGATTTGATACAACGCAGACAGCGCTCGGAGTTTAT
TTCCAATATCAAAGAGACTCTCCAAACTGCTCTCCAGGGAAATCCAAATC
TTATCCCATCTCTACTAACTTTGGCACTCAGTGATGCCCATGACTTATGA
TAAGCTTGCAGGCTACAAAATATGGGGGCCCTAATGCATCCAATATGCTC
ACCTCACACACAGCCCAAACCCACAAAATAACGGAATTTCCGCTGCCAAC
AATTTGCTACAAGGAAACCCACAACCGCCCTGCATCCCTCATCTAACGGT
CGGAACAAACATCCTTTGCCGAATCCCCTCCAGACCGCAGCGCCAGGAGG
CACGACCGAAGCATGTATTTAGGAACACCACCGTCACGCAAATGGTAGCC
CGCAGCTCAAGCGCACACCGGCGCCCACGTCACCCCGCCATACGCCTAAA
ACTACAGGCGAGAGGCCAGACAAAAAAAAGCACCATACAGAAACAACCAC
CGACACACGAGGCCGACCCCCAGACACAAGGGGATGGCAACCAAAAAGCG
AAACCACATGGGCCAACAGCGGTAACAAACACAAGATACACCACGAGCGA
CCCACAACCCAACCACGCAGCACACGAACCAGCCGCCGGAAGCCGCCGAA
ATCCACAAACGCCCAACCACAGACCACAACCCCACACACACCCAACAACC
ACCCCACAGGAACAGCGACACCAACCTGCGCCCGCGACACGGAACGCCTT
CAAAAAGAACACCACACAACGACGCCGACGCAGCTAGTCCACCNCCGGAC
ACACGCACCGCCGCACGCGCCTGCAGGAACAGCCA
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