EY744467

Overview
NameEY744467
Unique NameEY744467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744467 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.565e-33
Identity = 66/84 (78.57%), Postives = 70/84 (83.33%), Query Frame = 2
Query:  149 GTLHGGWTTDASAFPECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIIDDFQSVYRKNLLQESIVSMAVAGTFIGA 400
            G +HGG   D SAF ECFSL+WKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYI DDF+SV R   LQE IVSMAVAG  +GA
Sbjct:    4 GIIHGG--ADESAFKECFSLTWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRNTWLQEMIVSMAVAGAIVGA 85          

HSP 2 Score: 35.4242 bits (80), Expect = 1.565e-33
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  405 IGGWMNDPFVRRTSILVANFLFL 473
            IGGW ND   RR++IL+A+FLFL
Sbjct:   87 IGGWANDKLGRRSAILMADFLFL 109          
BLAST of EY744467 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.603e-26
Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 2
Query:  176 DASAFPECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIIDDFQSVYRKNLLQESIVSMAVAGTFIGA 400
            D + F EC+  +WK PY++RLA SAGIGGLLFGYDTGVISGALL+I +DF  V +K  LQ +IVSMAVAG  +GA
Sbjct:   10 DKTEFTECWRTTWKTPYIMRLALSAGIGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIVSMAVAGAIVGA 84          

HSP 2 Score: 36.5798 bits (83), Expect = 2.603e-26
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  405 IGGWMNDPFVRRTSILVANFLFL 473
            +GGW+ND F RR SIL+A+ LFL
Sbjct:   86 VGGWINDKFGRRMSILIADVLFL 108          
BLAST of EY744467 vs. ExPASy Swiss-Prot
Match: INT3_ARATH (Probable inositol transporter 3 OS=Arabidopsis thaliana GN=INT3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.778e-22
Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 2
Query:  194 ECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIIDDFQSVYRKNLLQESIVSMAVAGTFIGA 400
            E ++ +W+ PY++RLA SAGIGGLLFGY+TGVI+GALLYI ++F  V  K  LQE IVSM VAG  +GA
Sbjct:   15 EVWTTTWETPYIMRLALSAGIGGLLFGYNTGVIAGALLYIKEEFGEVDNKTWLQEIIVSMTVAGAIVGA 83          

HSP 2 Score: 35.8094 bits (81), Expect = 5.778e-22
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  405 IGGWMNDPFVRRTSILVANFLFL 473
            IGGW ND F RR S+L+A+ LFL
Sbjct:   85 IGGWYNDKFGRRMSVLIADVLFL 107          
BLAST of EY744467 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.724e-18
Identity = 46/75 (61.33%), Postives = 54/75 (72.00%), Query Frame = 2
Query:  188 FPECFSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIIDDFQSVYRKNLLQESIVSMAVAGTFIGARNRG 412
            FPE     + N Y+L L  +AGIGGLLFGYDTGVISGALLYI DDF+ V + + LQE+IVSMA+ G  IGA   G
Sbjct:   18 FPERRMSYFGNSYILGLTVTAGIGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALVGAMIGAAAGG 92          

HSP 2 Score: 25.0238 bits (53), Expect = 5.724e-18
Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = 3
Query:  408 GGWMNDPFVRRTSILVANFLF 470
            GGW+ND + R+ + L A+ +F
Sbjct:   91 GGWINDYYGRKKATLFADVVF 111          
The following BLAST results are available for this feature:
BLAST of EY744467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
INT2_ARATH1.565e-3378.57Probable inositol transporter 2 OS=Arabidopsis tha... [more]
INT4_ARATH2.603e-2665.33Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]
INT3_ARATH5.778e-2262.32Probable inositol transporter 3 OS=Arabidopsis tha... [more]
INT1_ARATH5.724e-1861.33Probable inositol transporter 1 OS=Arabidopsis tha... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744467 ID=EY744467; Name=EY744467; organism=Citrus sinensis; type=EST; length=941bp
CATCACTCCCTTATATCCCTATTTATAGTCCAAGTCCAACCACACCAAAC
CATTTTCCCCCCAAAATAGAGAAAACAAACTCCTAAATTGTATATCTTTT
AGCAGATATTAATTTGTAAAAAAAAAAAAAAAAGGCCTGAATATGGAGGG
AACACTACATGGAGGATGGACGACAGATGCGTCAGCGTTTCCAGAATGCT
TCTCTTTGTCTTGGAAAAATCCCTACGTTCTTCGACTTGCTTTCTCTGCT
GGAATTGGCGGCCTTCTCTTTGGCTACGACACTGGAGTCATATCAGGCGC
GCTACTTTATATCATAGATGACTTCCAATCCGTCTATAGAAAAAATTTAC
TGCAGGAAAGCATAGTTAGCATGGCTGTTGCTGGAACATTCATTGGAGCT
CGCAATCGGGGGATGGATGAATGATCCCTTTGTAAGGAGAACTTCCATCC
TAGTTGCCAATTTCCTGTTCCTCCGTTGCCGCTGAGAACAGGCTCGCTGC
GCCCCCCCGTGCTGCCCCCACCCTTGCCACCGGCGGCCCTAGCAACACGT
CGGGGCCACTGCACCCGGCACAACCCCGCCTCCTCACCGCGCGCCCCACG
CCCCGGACGTAGCCCAGCCGTGCTCCAGAACAGCCACCCGCATCGCGTGG
GCGCACCCACCAACAGACCCCGTGCAACGGGCACCCGCCTGCCCCCCCCC
CCACGCCACGAGCACGCACCCACCCCGCCCCCCCCCACCGGCGCGCCCAC
GCCCCACTCCCGCGCGCCGCCGGAAACCACCCCAGACAGAGCCATCACCA
ACGCGCGGCGCGCCGAGCCCGGTGTGCGACGCGACACACGGCCCCCGCGG
CGGACGAGCGCAGCTACTGCCGCCCTACCCAGCCCAACCCGCCACCCTCG
ACACCCAAACAACGCACCCCCCAACGTACGACACAACGCCG
back to top