EY744460

Overview
NameEY744460
Unique NameEY744460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.718e-26
Identity = 56/123 (45.53%), Postives = 82/123 (66.67%), Query Frame = 3
Query:  114 PNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPM 482
            PN   + ++GRVYCDTC+AGF T  T YIAGAKV++ECK   + ++  + +G TD+TGTY I + + H++ +C  VL++SP+ DC  V   R+R+ V+LT   GIS   R AN +G+ K  P+
Sbjct:   30 PNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVPL 152          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.429e-25
Identity = 52/121 (42.98%), Postives = 80/121 (66.12%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPG---RERSRVILTSYNGISSETRYANSMGFMKAEPM 482
            F VEG+VYCD C+  F T  +TY+ GAKV +EC++R+   ++YS + +TD +GTY+I V  DH++++C+  L  S   DC  V+     ++ +R+ LT  NGIS+  R AN +GFMK +P+
Sbjct:   27 FFVEGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKPL 147          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.758e-23
Identity = 48/116 (41.38%), Postives = 74/116 (63.79%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAE 476
            F VEG+VYCDTC+  FET  +  + GA VK++C++  +    +S EG TD  G YK+ V+ DH++ +C+  ++ SP+ DCK    G E++R+  +   GI +  R+AN + FMKAE
Sbjct:   27 FDVEGKVYCDTCRVQFETKLSENLEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAE 142          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.153e-22
Identity = 52/119 (43.70%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPM 482
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS NGI  +  RYAN + F + EP+
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPL 124          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.471e-22
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSE-TRYANSMGFMKAEPM 482
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS  GI  +  RYAN + F + EP+
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPL 124          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.840e-20
Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  129 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAP---GRERSRVILTSYNGISSETRYANSMGFMKAEPM 482
            F V+G VYCDTC+  F T  +T + GA VK+EC++  +    +  E  TD  G Y I V+ D +D +C+  L+ SP ++C  V+     ++ ++V LTS NG +S+ R AN++GFM+ EP+
Sbjct:   30 FKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEPL 150          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20
Identity = 43/124 (34.68%), Postives = 72/124 (58.06%), Query Frame = 3
Query:  111 RPNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAEPM 482
            +P    F ++G+VYCDTC+AGF T  + +I GA ++++CKD+++  V ++  G T + G Y +LV  DH+++ C+  LISS + DC  +         +    N ++  TR  N +GF K E +
Sbjct:    5 QPPVSQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEIPTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKEAL 128          
BLAST of EY744460 vs. ExPASy Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.837e-18
Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 3
Query:  111 RPNTKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVVYSREGKTDSTGTYKILVSEDHQDQLCDAVLISSPQNDCKTVAPGRERSRVILTSYNGISSETRYANSMGFMKAE 476
            +P    F ++G+VYCDTC+A F T  + +I GA V+++CKD ++ +V ++  G T + G Y +L+  DH+++ C+  LISS + DC  +         +    N ++  TR  N +GF+K E
Sbjct:    5 QPPVSQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFVLNTVNGTTRTINPLGFLKKE 126          
The following BLAST results are available for this feature:
BLAST of EY744460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSC13_MAIZE1.718e-2645.53Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE... [more]
OLEE1_BETVE9.429e-2542.98Olee1-like protein OS=Betula verrucosa PE=2 SV=1[more]
LAT52_SOLLC6.758e-2341.38Anther-specific protein LAT52 OS=Solanum lycopersi... [more]
PHLB_PHLPR1.153e-2243.70Pollen allergen Phl p 11 OS=Phleum pratense PE=1 S... [more]
LOLB_LOLPR7.471e-2242.86Major pollen allergen Lol p 11 OS=Lolium perenne P... [more]
CHE1_CHEAL1.840e-2039.67Pollen allergen Che a 1 OS=Chenopodium album PE=1 ... [more]
ALL1_OLEEU6.993e-2034.68Major pollen allergen OS=Olea europaea PE=1 SV=2[more]
LIGV1_LIGVU3.837e-1834.43Major pollen allergen Lig v 1 OS=Ligustrum vulgare... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-H02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744460 ID=EY744460; Name=EY744460; organism=Citrus sinensis; type=EST; length=927bp
CCACGCGTCCGATTCAATCTTGTTCAGCTTCCTTCATCTCCCATAAGACA
ATGGCTAGAACATTGTTGTTGATCGCTCTCTGCGTGCTGCCGGCTCTGGT
GAGCGCGGTCCGGCCCAACACTAAACCGTTCTCGGTTGAAGGACGCGTGT
ACTGCGACACCTGCCAAGCCGGCTTTGAGACCCCCGCTACCACCTACATC
GCCGGTGCCAAGGTTAAGGTTGAATGCAAAGACAGGAAGTCAATGCAAGT
AGTATATAGCAGGGAAGGGAAAACAGACTCAACTGGAACATATAAGATCC
TCGTTTCAGAAGACCATCAGGATCAACTTTGCGATGCTGTCCTCATTAGT
AGCCCCCAGAATGACTGCAAAACAGTTGCCCCAGGGCGTGAGCGTTCCCG
TGTGATCTTGACCAGTTACAACGGCATTTCTTCTGAAACCCGATATGCCA
ATTCAATGGGCTTCATGAAGGCAGAGCCCATGGTCTGGCTGTGCTGAGGG
TCTCAGGCTATATCAGGAGGGAGGAGTGTAGAGAATGGTGTGGCATGGCT
TTTTTTCTATCCTTTTCCATTTGGTTTTAACTTTGGCGATGGCTTACACG
CCCCCCCTTCTATCCGCAAGCGCCCGAATCGCTGTCGCACTCCACAAACT
CAAAAAAACAACATACCCTGACCCACCCGGCGACGCTTCCCACGACCACG
CAGATCCGAACCGCCGGACGCTCCTCACGGACTAGGGGAGACACTGACGC
ACCCCCGTCCTAGCGCCCGCCGCCACAATCCGCACCACGGGAAATCGGCG
GGAACACGAATGGCGACAAATGAGGCACACTGCCTAACCCATCGTTAACA
AAAAACAATGACAAGAAAGTACACACAAACCCAACCAAAACACGCGGACA
CTGGGCACGGCGATGCACGACCTCAAT
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