EY744442

Overview
NameEY744442
Unique NameEY744442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.724e-44
Identity = 86/121 (71.07%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VGARFLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            VGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F +VSDLV GL+ LM
Sbjct:  193 VGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 313          
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.724e-44
Identity = 86/121 (71.07%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VGARFLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            VGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F +VSDLV GL+ LM
Sbjct:  193 VGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 313          
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.724e-44
Identity = 86/121 (71.07%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VGARFLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            VGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F +VSDLV GL+ LM
Sbjct:  193 VGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 313          
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.724e-44
Identity = 86/121 (71.07%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VGARFLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            VGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+F +VSDLV GL+ LM
Sbjct:  193 VGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 313          
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.766e-43
Identity = 85/121 (70.25%), Postives = 99/121 (81.82%), Query Frame = 1
Query:    1 VGARFLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            VGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ E LTVYG G+QTR+F +VSDLV GL+ LM
Sbjct:  194 VGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALM 314          
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.952e-42
Identity = 84/121 (69.42%), Postives = 97/121 (80.17%), Query Frame = 1
Query:    1 VGARFLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            VGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+G RM ++DGRVVSNF+ QAL+ E LTVYG G QTR+F +VSDLV GL+ LM
Sbjct:  191 VGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLM 311          
BLAST of EY744442 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.125e-12
Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 1
Query:   13 FLLTSTSEVYGDPLHHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFPFVSDLVEGLMRLM 363
            F+  STS VYG+      + T    ++P GV       K T E L   Y +  G+ + I R F  YGPR   D        + Q L+++PLT++GDG+Q+R F ++SD V+G+  ++
Sbjct:  121 FVFASTSSVYGEKQGKVSENTSLSPLSPYGVT------KLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVL 229          
The following BLAST results are available for this feature:
BLAST of EY744442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
UXS1_RAT2.724e-4471.07UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB2.724e-4471.07UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE2.724e-4471.07UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN2.724e-4471.07UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_XENTR1.766e-4370.25UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
UXS1_DANRE1.952e-4269.42UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
YTCB_BACSU6.125e-1234.19Uncharacterized UDP-glucose epimerase ytcB OS=Baci... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-F08-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744442 ID=EY744442; Name=EY744442; organism=Citrus sinensis; type=EST; length=1007bp
GTGGGAGCGAGGTTCCTATTAACGAGTACCAGTGAAGTGTACGGTGACCC
TCTTCACCATCCACAGAAGGAGACTTACTGGGGCAACGTCAATCCTATCG
GTGTCCGAAGTTGTTACGATGAGGGAAAGCGAACTGCTGAAACGTTGACC
ATGGACTACCACAGAGGAGCTGGCGTGGAGGTTAGGATTGCTAGAATTTT
CAACACTTATGGACCCCGTATGTGTATCGATGATGGTCGCGTTGTCAGTA
ATTTTGTTGCTCAGGCTTTAAGGAAGGAGCCTTTGACTGTATATGGAGAT
GGGAAGCAGACTAGGAGTTTCCCATTTGTTTCTGATTTGGTGGAGGGTCT
GATGCGCCTCATGGAGGAAAAAACATGTGGGTCCTTCTAATCTTGGAAAT
CCGGGGGAATTTACCGTGATTGAACTTGCTCAGGCGGTGCCAGAAACAAT
TGACCCAGATGCAAAAATAAAGTTCCCGCCCACAACTGAAAATGATTCCA
CGCAGCAAGGACCCCTGATCTCCCAGGGATAACCAGGTACTTCGATCGTA
AACATCGGGTATACGGACGAAAGCGTTCCTCCACCATGTCAAGACTTATC
CGAGACCTCATCACAGCCACCCGCACGTACCCGAGGCGGCCCATCTCCCC
CCTCACGAAACAACAAACTCATACAACAAAGGTCGGGACAAACCTCTGAG
ACAAGAAGACCGAAAACCAAAACTCGCAGCACATGAGTCACTACACCCCC
ACCTGAGCCACCCGCAAAGCAGGGGATAGTGGCAACCTGGACAACCATTA
GGCACCCATCGAGACAGTGCCCCTGGCCCCTGGCCCGCGCACGCCAAGGG
GAATGGCCACAGAAATGCACTCTGAACCGATAACGAACGAAGCATACCGA
ACGCTGAGGTACAAACATCCAACCCCCGCACCCAATCGACACATCAGACC
GGCAAGACCACCTCGACAACGGGGCCGACACAACAACTGGCGCCACCACG
TAAGCCC
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