EY744436

Overview
NameEY744436
Unique NameEY744436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1042
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744436_ssr661 microsatellite EY744436_ssr661:661..670. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.414e-43
Identity = 86/108 (79.63%), Postives = 94/108 (87.04%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGLNAAMTPLSAIDDK 324
            QAPE+ALGGI SVLNQKRG VFEEMQRPGTPLYNIKAYLPV+ESFGFS TLRA+TSGQAFPQCVFDHW+MM SDPLE  +QA+ LV+ IR RKGL   MTPLS  +DK
Sbjct:  735 QAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDK 842          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.583e-37
Identity = 74/108 (68.52%), Postives = 86/108 (79.63%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGLNAAMTPLSAIDDK 324
            Q PE A+GG+ SVLNQKRG VFEE+QRPGTP++N+KAYLPVIESFGF+ TLRAAT+GQAFPQCVFDHW+ M SDP +  +QA  LV DIR RKGL      LS  +DK
Sbjct:  737 QCPEQAMGGVYSVLNQKRGMVFEELQRPGTPIFNLKAYLPVIESFGFTSTLRAATAGQAFPQCVFDHWEAMGSDPTQVGSQANTLVMDIRKRKGLKPEPAALSEYEDK 844          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.051e-30
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q  E+A+GGI SVLN+KRG VF E QR GTPLYNIKAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M+ DPL+P ++  Q+V + R RKGL
Sbjct:  734 QVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGL 828          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.162e-29
Identity = 61/95 (64.21%), Postives = 73/95 (76.84%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q PE A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V + R R GL
Sbjct:  734 QCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVVEARKRHGL 828          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.382e-29
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q PE A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLP+ ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P+T+A ++V   R R+G+
Sbjct:  734 QCPEQAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPINESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPSTKAGEIVLAARKRQGM 828          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.417e-29
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q PE A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   R R G+
Sbjct:  734 QCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGM 828          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.768e-29
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q PE A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   R R G+
Sbjct:  734 QCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGM 828          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.768e-29
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q PE A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V   R R G+
Sbjct:  734 QCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVTAARKRHGM 828          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.533e-29
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGLNAAMTPLSAIDDK 324
            Q PE A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   R R G+   +       DK
Sbjct:  734 QCPESAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGSDPLDPTSKAGEIVTAARKRHGMKEVVPGWQEYYDK 841          
BLAST of EY744436 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 7.533e-29
Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 QAPEHALGGISSVLNQKRGPVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMTSDPLEPATQAAQLVADIRNRKGL 285
            Q PE+A+GGI SVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M  +PL+PA++  ++V   R R+G+
Sbjct:  734 QCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGM 828          
The following BLAST results are available for this feature:
BLAST of EY744436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
EF2_BETVU1.414e-4379.63Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE2.583e-3768.52Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_SCHPO1.051e-3067.37Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_ASHGO1.162e-2964.21Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_KLULA3.382e-2962.11Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_CANGA4.417e-2963.16Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_YEAST5.768e-2963.16Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SACKL5.768e-2963.16Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_SACCA7.533e-2957.41Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_PICPA7.533e-2962.11Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-F02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744436 ID=EY744436; Name=EY744436; organism=Citrus sinensis; type=EST; length=1042bp
CAGGCTCCCGAGCACGCCCTTGGTGGTATTTCCAGTGTTCTCAATCAGAA
ACGTGGTCCCGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTACA
ACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCACT
TTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTTGATCA
CTGGGACATGATGACATCCGATCCACTGGAGCCTGCCACACAGGCTGCAC
AGCTTGTTGCTGATATCAGGAACAGGAAGGGCTTGAACGCAGCAATGACA
CCACTATCAGCAATTGACGACAAACCGTAAACATTTCGTCTTGACATCAG
CGTCAGACACTTGCCCCACCATTGCTTGCGGAAACGACGGAGCAGGCAAC
CACATGACACCGGCTGAGCCGAGTAACAGGACGAACCTCCAAATCAACTC
ACATGATCGAACCCAACAGGCGAAAATAGTCCCCCAAACTCCAGACACGA
CCCACGACTATACTGCACTGATGCTGCAGACACCAGCCATACACCACAAA
CCGGACCCACCACAAGCCTCATATCAACCTCCAAAACACCCACCACCACA
CACAAAACAATGATAACAAAAAGACGAAAAGATAAAAAACACCGAGAACA
CAAAAACAACCACACACACACCAGCACACGAAGCGCCAGTGGAGAGAAGC
TGCGCGAACAGCCACTGCGAGGCCCCAACATCAATTCAACACACCACGAC
CAACAAACACAGCCAACCCGCACCGCCCGGAACGCCCCAACACAAAACAC
CCACAACATACGATGCAAACGCCCCACACCACTCCTCAGTCAAGATAACC
GAGCAACACAGCACACAACAACACACAGAACGCCGAGACCCACAAAGAAC
ACAAAACACACCCCGCCCNGCCCCCTCACCGCCAGCAAGACCACAACTCT
TAAACAACAAAAGCATGAAAAAAGAACAGCAACACAAAGATACAAGAACC
CACACACCACCAACACAACAAAAAAACAAAACAGAAGCAAAG
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