EY744435

Overview
NameEY744435
Unique NameEY744435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.104e-15
Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT EEVKKIV++LNE +              ++ L  V +   A   ++    C V+KGG F G++S E+L  +GI  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQ-NCWVKKGGAFTGEVSAEMLVNLGIPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 4.054e-15
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT ++V KIV +LNEGQ              ++ L +V S     I ++    C V+KGG F G++S E+L  + I  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQ-NCWVKKGGAFTGEVSAEMLVNLSIPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT ++V+KIV  LNEGQ              ++ L +V S       ++    C V+KGG F G++S E+L  +G+  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQ-NCWVKKGGAFTGEVSAEMLVNLGVPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14
Identity = 44/95 (46.32%), Postives = 56/95 (58.95%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            M RKFFVGGNWKCNGT EEVKKIV+ LNE Q              ++ L LV S+  +   ++    C V+KGG F G++S E+L  + I  VIL
Sbjct:    1 MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQ-NCWVKKGGAFTGEVSAEMLVNLDIPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 3.432e-14
Identity = 41/95 (43.16%), Postives = 55/95 (57.89%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT E+V+ IV  LN GQ              ++ L +V +     I ++    C V+KGG F G++S E+L  +G+  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQ-NCWVKKGGAFTGEVSAEMLANLGVPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.225e-13
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT  +V+ IV+ LN GQ              ++ L  V       I ++    C V+KGG F G++S E+L  +GI  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQ-NCWVKKGGAFTGEVSAEMLVNLGIPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.905e-13
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT EEVKKI++ LN                 ++ L LV +       ++    C V+KGG F G++S E+L  + I  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQ-NCWVKKGGAFTGEVSAEMLVNLSIPWVIL 94          
BLAST of EY744435 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.453e-13
Identity = 41/95 (43.16%), Postives = 52/95 (54.74%), Query Frame = 1
Query:   28 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLILGLVNSSWNALIDMSLTITCCVEKGGDFLGDISDELLTRVGIACVIL 312
            MGRKFFVGGNWKCNGT E V KIV  LNE                ++ L   N+     I ++    C V+KGG F G++S ++L  +GI  VIL
Sbjct:    1 MGRKFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQ-NCWVKKGGAFTGEVSAQMLANLGITWVIL 94          
The following BLAST results are available for this feature:
BLAST of EY744435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TPIS_COPJA3.104e-1546.32Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_ORYSJ4.054e-1545.26Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_MAIZE5.295e-1544.21Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH1.541e-1446.32Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_HORVU3.432e-1443.16Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_SECCE2.225e-1343.16Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_PETHY2.905e-1343.16Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_STELP8.453e-1343.16Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-F01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744435 ID=EY744435; Name=EY744435; organism=Citrus sinensis; type=EST; length=937bp
CCACGCGTCCGCACGCACTCGTCGAACATGGGCAGGAAGTTCTTCGTCGG
CGGTAACTGGAAATGCAATGGAACACCTGAAGAAGTGAAAAAGATAGTGA
GCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTCGTTGAAGTCGTT
GTTACCCCTCCGTTTCTGATTCTAGGACTGGTGAATAGTTCGTGGAATGC
CTTGATTGACATGTCCCTGACCATAACTTGCTGCGTGGAGAAAGGAGGTG
ATTTCCTCGGTGACATTAGTGACGAATTGCTAACACGTGTAGGTATTGCT
TGCGTCATTCTTGTTGCCTATGCTACTGTATTCATTGCTTTGTGGGTGCG
ATGTACTTGGTATCACATTCAGCCCCTACTCCTCGATGAACCCGGAGGGC
GCACACATTCTCAGCGTCTTGGGAGTGGGGAGCTGCGCCGCGTCGCCACG
GGCGGAGCGACCCCGCTAGGGGACGACCCCCCCCCCGGGACGACCCTCGA
GGGCGTTGACCACCATCCCCGCATATCACTCAGTTCCGCGGGCCCCCCCG
CGCCCTCCCCCCCACCACACACACCACGACAGCGACCCCGGCGCAGCAGA
CCTCCCCAGTGTACCCACTCCAGCTCACGGCCCCCCTGCACGTCCACGCA
CGACACGCGAGAGTTGCCCGCGGCGCCGGCAACGCGCGCACCAACGCGCT
GACCGCAGATAAAGAGAGGGGGAGAAAACGGACAGCGGGGACCGAACCGC
AAAAGGTCACTCTTGACCTCGCTACCCACCCCGCCCCCTGCTCCATACAC
TCAACTACAAAAATCTCACGAGCATTACGCTAACCCACTCGCACCGACTC
CTCCCGACCACCCGACAGGGTGCGTCGACACCCGAACATAAAGCCCTAGC
CCGCAGCCAACCGAGTCCGCGCACCAGACGACGCTGC
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