EY744432

Overview
NameEY744432
Unique NameEY744432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744432 vs. ExPASy Swiss-Prot
Match: SIN3_ARATH (Paired amphipathic helix protein Sin3 OS=Arabidopsis thaliana GN=SIN3 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.688e-19
Identity = 46/78 (58.97%), Postives = 65/78 (83.33%), Query Frame = 1 
Query:  325 FSQELSFCEKVKDKLR-DDYQEFLRCLHLYTKEIITRSELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSK 555
            +SQ+L+  ++VK+KL   +YQEFLRCL+L++KEII+R ELQSLVG+L+G YPDLMD F  FL +CEK+E LL+ +++K
Sbjct:  310 YSQDLAIVDRVKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKNEGLLSGILTK 387
The following BLAST results are available for this feature:
BLAST of EY744432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SIN3_ARATH1.688e-1958.97Paired amphipathic helix protein Sin3 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-E10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744432 ID=EY744432; Name=EY744432; organism=Citrus sinensis; type=EST; length=972bp
AAAAGAGAAAGTAGGAAAAATTTGCAATCGTTATATTCATCAAGCTTTTG
AGATGCATACAGCCTTTTACCAGTTTCCATTTTGTGTTTATTTCATATGT
GTTCACCTACCTGCAGGTGCTGATACTTCTTAGTGAATTAAAGTTTTGGG
ATTGAGGCATTTCTTTCTTCATAAAGTCCCTTGCACTTTGCTTATAAACA
CTCTTGAGCAAGCAAAAGACTCTCTATCATCTACTTAAATATGCATAACA
TGCTGGCCAACAAGAATTTGATTCCTTTCTCAAATGTTCTATTTCCTTAA
CTTATTTCATGTTATACAGGTATGTTCAGCCAGGAGCTCTCTTTCTGTGA
GAAAGTCAAGGATAAGTTACGTGATGATTACCAGGAGTTTCTGAGGTGCC
TTCATCTCTATACCAAGGAAATTATCACACGATCAGAGTTGCAATCTTTG
GTGGGCGACTTGCTTGGGAGATATCCAGATCTAATGGATGGGTTCAATGG
ATTTTTGGCACGTTGCGAGAAAAGTGAGGAATTACTTGCTGATGTTATGA
GCAAAAAAATCATTGTGGAATGAAGGACGTTTACCCAAATCCGTTAAGGT
AGAGGAAAGGAATAAAAAATCGAAATCGTGAAAAAAAATGATGGGGGTTA
AAAATAGGGACCCGCCAAGCCCCAAGAAAAAAAATAAACTTTGCAAAAAG
TGGTACCCTTTTGTCAACAAAAAATGTAGGGCCCCAAGAATTCCATTTGT
CCCCCCGCCAAGGATTACTAATCTTTGGCCAAAACCCATTTCAAAAACTT
TCCACCCCCTCTACTTGTGAAACCCTGCCCTCTCCCCTTTTTCCCACCAA
TTGGCCAAAAAAAAAATCTCTATTTTCCTTTACCAAACCCCAAAAAAAAC
GAAAACTTGTGGGGGCTGAAATGCTACAGATGAAACTTTCTAGGGTATTA
CTTTTTCACTATATACAAAAAA
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