EY744423

Overview
NameEY744423
Unique NameEY744423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744423 vs. ExPASy Swiss-Prot
Match: PYRD2_RAT (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Rattus norvegicus GN=Pyroxd2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.904e-12
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 2 
Query:   17 HAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMITT 202
            H PGSGYVLLHHVMG  +G +  WS+V+GGMG++S AI+ +AT  GA I     V+++ + +
Sbjct:  257 HTPGSGYVLLHHVMGSLEGMQGAWSYVQGGMGALSDAIASSATAHGASIFTEKTVAKVQVNS 318
[Close]
BLAST of EY744423 vs. ExPASy Swiss-Prot
Match: PYRD2_MOUSE (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 2 
Query:   17 HAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMITT 202
            H PGSGYVLLHHVMG  +G +  WS+V+GGMG++S AI+ +A   GA I     V+++ + +
Sbjct:  256 HTPGSGYVLLHHVMGSLEGTQGAWSYVQGGMGALSDAIASSAATRGASIFTEKTVAKVQVNS 317
[Close]
BLAST of EY744423 vs. ExPASy Swiss-Prot
Match: PYRD2_PONAB (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Pongo abelii GN=PYROXD2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 2 
Query:   17 HAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMITT 202
            H PGSGYVLLHHVMG  +G +  W +V+GGMG++S AI+ +AT  GA I     V+++ + +
Sbjct:  257 HTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTVAKVQVNS 318
[Close]
BLAST of EY744423 vs. ExPASy Swiss-Prot
Match: PYRD2_HUMAN (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Homo sapiens GN=PYROXD2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 2 
Query:   17 HAPGSGYVLLHHVMGETDGDRNLWSHVEGGMGSVSLAISKAATKAGAHILVNTEVSQIMITT 202
            H PGSGYVLLHHVMG  +G +  W +V+GGMG++S AI+ +AT  GA I     V+++ + +
Sbjct:  257 HTPGSGYVLLHHVMGGLEGMQGAWGYVQGGMGALSDAIASSATTHGASIFTEKTVAKVQVNS 318
The following BLAST results are available for this feature:
BLAST of EY744423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PYRD2_RAT8.904e-1250.00Pyridine nucleotide-disulfide oxidoreductase domai... [more]
PYRD2_MOUSE1.519e-1148.39Pyridine nucleotide-disulfide oxidoreductase domai... [more]
PYRD2_PONAB4.419e-1148.39Pyridine nucleotide-disulfide oxidoreductase domai... [more]
PYRD2_HUMAN4.419e-1148.39Pyridine nucleotide-disulfide oxidoreductase domai... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-D12-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744423 ID=EY744423; Name=EY744423; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGGTATCCATGCACCCGGGAGTGGATACGTGCTGCTGCATC
ATGTTATGGGTGAAACTGATGGTGATCGTAACCTTTGGTCGCATGTTGAA
GGTGGGATGGGTTCAGTATCCTTGGCCATAAGTAAAGCTGCCACCAAAGC
TGGTGCACATATTCTAGTGAATACAGAGGTTTCACAAATAATGATCACGA
CACTCTGGTGAAGTAGATGGGGAATTGCTAGTGGATGGGCACCCAACTCA
TCCTTCGCCCGCTCGAGCCACCCCGAGCCCTCCTCGGACTTCCCATGAGC
CGCGCGCCGCCACCAAGATGATACCGCTCACACATCCCGCCCGCGTACAC
CGCCCCAGACACCGCAGCCGACCACGCCCCCGCACAGCCCCGCCCGGCGG
GCCGCCGCGCCCCCAGCCGCGCACGGACCGCACGCGGCCCAGCAGAGGCC
CGGAGCGCCCGAGGACGATCGCGGTACCCCCAACGCCCCCCCCACGCCGG
CCCCGCCGAACCAGCCACACCCCGCCCGCCACCGCGCCCCCCCCACGCCG
CGCCCGCCCGCGCCCGAGCACCACCGCCCAGCCCGGCAGCGGGCAGGGCA
GAGCGGAGCACGCGCGGCGCCCCCACCCCTCAACCGGCCATACCGAGCCG
CACAACCACCCACACCCGCACCGCGAGGCCGGGGAGCGAGTCACCCACCT
CCCCGGGGCCCAGCCCGACGGTACGGCCCACCGACGACCCGCCAGCCCCA
GCGCCCACAGCACAGCACGGACACCGCAGGCACACCCCGGGGCCCGCGAC
TGACAGAAGCCACCGCGAAATGGCGCAGACCCGCCTGTGCGGCGGCCCAC
GCGCCAGGCGGAGCAACCCCCACGACGGTGCGCCCCCGGCGCACGCGCCT
TCCCG
back to top