EY744421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH11_ARATH (DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana GN=RH11 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.039e-59 Identity = 105/136 (77.21%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 EREVNPFGDD E E+ENTGINFDAYEDIPVETSG +VPP VNTFA+IDLG+ALNLNIRRCKYV+PTPVQRHAIPI + RDLMACAQTGSGKTAAFCFPIISGIM++Q+V+RPRGSR VYP ++ P +E Sbjct: 105 EREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRE 240 HSP 2 Score: 31.9574 bits (71), Expect = 1.039e-59 Identity = 23/66 (34.85%), Postives = 34/66 (51.52%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752 A+IL+PTREL+ QIH + F TGV+ VA+ H + L++G + P R L+ Sbjct: 232 AVILSPTRELACQIHD-EAKKFSYQTGVKVVVAY--GGTPIHQQLRELERGCDILVATPGRLNDLL 294
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 1.052e-56 Identity = 107/137 (78.10%), Postives = 120/137 (87.59%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPV-AEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 EREVNPF +D +P E++NT INFDAYEDIP+ETSG+NVPP VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI + GRDLMACAQTGSGKTAAFCFPIISGIM++Q+VQRPRGSRTVYP ++ P +E Sbjct: 112 EREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRE 248
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana GN=RH52 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 6.380e-54 Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579 + E NPFG+D A+ V E+ENT INF+AYEDIP+ETSG+NVPP VNTFAEIDLGEALNLNI+RCKYVKPTPVQR+AIPI GRDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPRG R VYP ++ P +E Sbjct: 100 DTETNPFGNDGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRE 235
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 8.623e-51 Identity = 102/140 (72.86%), Postives = 112/140 (80.00%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEEE--NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQENS 585 +RE NPF + E + + NTGINFDAYEDIPVETSG +VPP VNTFAEIDLG+ALN NIRRCKYVKPTPVQR+AIPISI GRDLMACAQTGSGKTAAFCFPIISGIM + QRPRGSRT YP L+ P +E S Sbjct: 126 DREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELS 265
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 7.300e-50 Identity = 101/138 (73.19%), Postives = 111/138 (80.43%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQENS 585 +RE +PF + AE E ENTGINF+AYEDIPVETSG +VPP NTFAEIDLG+ALN NIRRCKYVKPTPVQR+AIPISI GRDLMACAQTGSGKTAAFCFPIISGIMR + R RGSRT YP L+ P +E S Sbjct: 124 DREPDPFANSEAAEVDF-EGENTGINFEAYEDIPVETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELS 260
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica GN=Os11g0599500 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.165e-47 Identity = 100/147 (68.03%), Postives = 111/147 (75.51%), Query Frame = 1 Query: 172 EREVNPFGDDVGAEQPVAEE-------ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--GSRTVYPSWLLFLPPQENS 585 +RE NPFG+D A +E +NTGINFDAYEDIPVETSG VPP V TFAEIDLG+ALN NIRRCKYV+PTPVQR+AIPIS+ GRDLMACAQTGSGKTAAFCFPIISGIMR QRP+ G RT P L+ P +E S Sbjct: 102 DREPNPFGNDGDAAAGAGDEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELS 248
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 3.188e-29 Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 1 Query: 235 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV-----YPSWLLFLPPQE 579 NTGINFD YEDIPVE +G+NVPP + +F ++ L E + N+ +Y KPTPVQ+HAIPI I GRDLMACAQTGSGKTAAF PI++ + +V P+ +R YP L+ P +E Sbjct: 270 NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRE 389
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_RANLE (Probable ATP-dependent RNA helicase DDX4 OS=Rana lessonae GN=ddx4 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 6.693e-29 Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 501 E + + TGINFD Y+DI VE SG +VPPA+ TF E +L ++L N+ + YVK TP+Q+H+IPI + GRDLMACAQTGSGKTAAF PI++ +M Sbjct: 253 ESDIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLM 349 HSP 2 Score: 33.113 bits (74), Expect = 6.693e-29 Identity = 25/70 (35.71%), Postives = 35/70 (50.00%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764 A+I+APTREL +QI++ R F T VR V + H K + +G P R + +IR EK Sbjct: 366 AIIVAPTRELINQIYL-DARKFSYGTCVRPVVIY--GGTQMFHSLKQISEGCNILCATPGRLLDVIRKEK 432
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_XENLA (Probable ATP-dependent RNA helicase DDX4 OS=Xenopus laevis GN=ddx4 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.478e-28 Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS-----GIMREQYVQ 519 E + + +GINFD Y++I V+ +G++VPPA+ TF E +L E L N+ R YVK TPVQ+H+IPI + GRDLMACAQTGSGKTAAF PI+S GI QY+Q Sbjct: 241 EDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQ 348 HSP 2 Score: 30.8018 bits (68), Expect = 1.478e-28 Identity = 23/70 (32.86%), Postives = 35/70 (50.00%), Query Frame = 3 Query: 555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764 A+I+APTREL +QI++ R F T VR V + H + ++KG P R + ++ EK Sbjct: 354 AIIIAPTRELINQIYL-DARKFSYGTCVRPVVVY--GGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEK 420
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.026e-27 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--------GSRTVYPSWLLFLPPQE 579 EQ + NTGINF+ Y+DIPVE +G N PP + F++ID+GE + NI +Y +PTPVQ+HAIPI G RDLMACAQTGSGKTAAF PI+S I + + + G R YP L+ P +E Sbjct: 145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRE 275 The following BLAST results are available for this feature:
BLAST of EY744421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY744421 ID=EY744421; Name=EY744421; organism=Citrus sinensis; type=EST; length=996bpback to top |