EY744421

Overview
NameEY744421
Unique NameEY744421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length996
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH11_ARATH (DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana GN=RH11 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.039e-59
Identity = 105/136 (77.21%), Postives = 118/136 (86.76%), Query Frame = 1
Query:  172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            EREVNPFGDD   E    E+ENTGINFDAYEDIPVETSG +VPP VNTFA+IDLG+ALNLNIRRCKYV+PTPVQRHAIPI +  RDLMACAQTGSGKTAAFCFPIISGIM++Q+V+RPRGSR VYP  ++  P +E
Sbjct:  105 EREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRE 240          

HSP 2 Score: 31.9574 bits (71), Expect = 1.039e-59
Identity = 23/66 (34.85%), Postives = 34/66 (51.52%), Query Frame = 3
Query:  555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLI 752
            A+IL+PTREL+ QIH    + F   TGV+  VA+       H   + L++G +     P R   L+
Sbjct:  232 AVILSPTRELACQIHD-EAKKFSYQTGVKVVVAY--GGTPIHQQLRELERGCDILVATPGRLNDLL 294          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH37_ARATH (DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana GN=RH37 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 1.052e-56
Identity = 107/137 (78.10%), Postives = 120/137 (87.59%), Query Frame = 1
Query:  172 EREVNPFGDDVGAEQPV-AEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            EREVNPF +D    +P   E++NT INFDAYEDIP+ETSG+NVPP VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPI + GRDLMACAQTGSGKTAAFCFPIISGIM++Q+VQRPRGSRTVYP  ++  P +E
Sbjct:  112 EREVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRE 248          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52_ARATH (DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana GN=RH52 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 6.380e-54
Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 1
Query:  172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQE 579
            + E NPFG+D  A+  V E+ENT INF+AYEDIP+ETSG+NVPP VNTFAEIDLGEALNLNI+RCKYVKPTPVQR+AIPI   GRDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPRG R VYP  ++  P +E
Sbjct:  100 DTETNPFGNDGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRE 235          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH37_ORYSJ (DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica GN=PL10A PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 8.623e-51
Identity = 102/140 (72.86%), Postives = 112/140 (80.00%), Query Frame = 1
Query:  172 EREVNPFGDDVGAEQPVAEEE--NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQENS 585
            +RE NPF +    E    + +  NTGINFDAYEDIPVETSG +VPP VNTFAEIDLG+ALN NIRRCKYVKPTPVQR+AIPISI GRDLMACAQTGSGKTAAFCFPIISGIM  +  QRPRGSRT YP  L+  P +E S
Sbjct:  126 DREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELS 265          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52B_ORYSJ (DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 7.300e-50
Identity = 101/138 (73.19%), Postives = 111/138 (80.43%), Query Frame = 1
Query:  172 EREVNPFGDDVGAEQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPSWLLFLPPQENS 585
            +RE +PF +   AE    E ENTGINF+AYEDIPVETSG +VPP  NTFAEIDLG+ALN NIRRCKYVKPTPVQR+AIPISI GRDLMACAQTGSGKTAAFCFPIISGIMR +   R RGSRT YP  L+  P +E S
Sbjct:  124 DREPDPFANSEAAEVDF-EGENTGINFEAYEDIPVETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELS 260          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: RH52C_ORYSJ (DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica GN=Os11g0599500 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.165e-47
Identity = 100/147 (68.03%), Postives = 111/147 (75.51%), Query Frame = 1
Query:  172 EREVNPFGDDVGAEQPVAEE-------ENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--GSRTVYPSWLLFLPPQENS 585
            +RE NPFG+D  A     +E       +NTGINFDAYEDIPVETSG  VPP V TFAEIDLG+ALN NIRRCKYV+PTPVQR+AIPIS+ GRDLMACAQTGSGKTAAFCFPIISGIMR    QRP+  G RT  P  L+  P +E S
Sbjct:  102 DREPNPFGNDGDAAAGAGDEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELS 248          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.188e-29
Identity = 64/120 (53.33%), Postives = 82/120 (68.33%), Query Frame = 1
Query:  235 NTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTV-----YPSWLLFLPPQE 579
            NTGINFD YEDIPVE +G+NVPP + +F ++ L E +  N+   +Y KPTPVQ+HAIPI I GRDLMACAQTGSGKTAAF  PI++ +    +V  P+ +R       YP  L+  P +E
Sbjct:  270 NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRE 389          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_RANLE (Probable ATP-dependent RNA helicase DDX4 OS=Rana lessonae GN=ddx4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 6.693e-29
Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIM 501
            E  + +   TGINFD Y+DI VE SG +VPPA+ TF E +L ++L  N+ +  YVK TP+Q+H+IPI + GRDLMACAQTGSGKTAAF  PI++ +M
Sbjct:  253 ESDIFKHYQTGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLM 349          

HSP 2 Score: 33.113 bits (74), Expect = 6.693e-29
Identity = 25/70 (35.71%), Postives = 35/70 (50.00%), Query Frame = 3
Query:  555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            A+I+APTREL +QI++   R F   T VR  V +        H  K + +G       P R + +IR EK
Sbjct:  366 AIIVAPTRELINQIYL-DARKFSYGTCVRPVVIY--GGTQMFHSLKQISEGCNILCATPGRLLDVIRKEK 432          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX4_XENLA (Probable ATP-dependent RNA helicase DDX4 OS=Xenopus laevis GN=ddx4 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.478e-28
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIIS-----GIMREQYVQ 519
            E  +  +  +GINFD Y++I V+ +G++VPPA+ TF E +L E L  N+ R  YVK TPVQ+H+IPI + GRDLMACAQTGSGKTAAF  PI+S     GI   QY+Q
Sbjct:  241 EDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQ 348          

HSP 2 Score: 30.8018 bits (68), Expect = 1.478e-28
Identity = 23/70 (32.86%), Postives = 35/70 (50.00%), Query Frame = 3
Query:  555 ALILAPTRELSSQIHV*SPRNFPNPTGVRGGVAFRRNHHSTHHLRKLLKKGVEYSFGQPPRKMGLIRVEK 764
            A+I+APTREL +QI++   R F   T VR  V +        H  + ++KG       P R + ++  EK
Sbjct:  354 AIIIAPTRELINQIYL-DARKFSYGTCVRPVVVY--GGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEK 420          
BLAST of EY744421 vs. ExPASy Swiss-Prot
Match: DDX3Y_PONAB (ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.026e-27
Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  211 EQPVAEEENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISIGGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPR--------GSRTVYPSWLLFLPPQE 579
            EQ +    NTGINF+ Y+DIPVE +G N PP +  F++ID+GE +  NI   +Y +PTPVQ+HAIPI  G RDLMACAQTGSGKTAAF  PI+S I  +   +  +        G R  YP  L+  P +E
Sbjct:  145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRE 275          
The following BLAST results are available for this feature:
BLAST of EY744421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
RH11_ARATH1.039e-5977.21DEAD-box ATP-dependent RNA helicase 11 OS=Arabidop... [more]
RH37_ARATH1.052e-5678.10DEAD-box ATP-dependent RNA helicase 37 OS=Arabidop... [more]
RH52_ARATH6.380e-5473.53DEAD-box ATP-dependent RNA helicase 52 OS=Arabidop... [more]
RH37_ORYSJ8.623e-5172.86DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sa... [more]
RH52B_ORYSJ7.300e-5073.19DEAD-box ATP-dependent RNA helicase 52B OS=Oryza s... [more]
RH52C_ORYSJ1.165e-4768.03DEAD-box ATP-dependent RNA helicase 52C OS=Oryza s... [more]
DDX3_DROME3.188e-2953.33ATP-dependent RNA helicase bel OS=Drosophila melan... [more]
DDX4_RANLE6.693e-2956.70Probable ATP-dependent RNA helicase DDX4 OS=Rana l... [more]
DDX4_XENLA1.478e-2854.63Probable ATP-dependent RNA helicase DDX4 OS=Xenopu... [more]
DDX3Y_PONAB1.026e-2749.62ATP-dependent RNA helicase DDX3Y OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-D10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744421 ID=EY744421; Name=EY744421; organism=Citrus sinensis; type=EST; length=996bp
CCACCAACCTCTTCTGAACCTCCTGCTTCGTCACGAGAATCTACTGAACC
TGCCAGTGGCCCCGGCTGGGGCAGTGGTTCGAGGCCCGATTTTGGGCGTG
GTCAGGGTTACGGCTCTGGTGGTAGAAGTGGCGGTGGTTGGAATAATAGA
AGTGGGGGTTGGGACCGAAGGGAACGTGAAGTGAACCCGTTTGGTGATGA
TGTTGGTGCAGAGCAGCCGGTTGCTGAAGAAGAAAACACGGGTATTAATT
TTGATGCTTATGAGGATATTCCAGTGGAGACAAGTGGAGAAAATGTGCCA
CCGGCAGTTAATACATTTGCAGAAATTGATTTGGGGGAAGCTTTGAATCT
TAATATTAGGAGGTGCAAGTATGTCAAACCGACGCCTGTTCAGCGTCATG
CGATTCCTATATCGATTGGTGGGCGAGATTTAATGGCCTGTGCTCAGACA
GGGTCGGGGAAGACAGCTGCCTTTTGTTTTCCAATTATTAGTGGGATTAT
GCGTGAGCAGTACGTACAGAGACCACGTGGATCGCGGACTGTTTATCCCT
CCTGGCTCTTATTCTTGCCCCCACAAGAGAACTCTCGTCTCAGATCCATG
TTTGAAGCCCCAGAAATTTTCCTAATCCAACTGGGGTCAGGGGGGGGGTT
GCTTTCCGAAGGAACCACCATTCAACCCACCATTTGCGAAAACTTTTAAA
AAAAGGGGTTGAATATTCCTTTGGCCAACCCCCGCGAAAAATGGGTTTGA
TTCGCGTTGAAAAAACCTAAAATTTCTCTTTGCAAAAAGATTAGAATCCT
TTACCGCTTCCAATGAAGGGCAGACGCGGAGGCTGGATATTGGGGGTTTT
TGGCCCCCCGCAACGCCAAACAATATTTGCTGCCCCACCAACGGGTCTTA
TGCCCTCCCCCCCACCTGTGGGTTACAAACAAAATAACAACGGGCTCTTT
TCTTCCGGGCTGCCCCACCTTCCTCCCTCACAAAAAAACAATACTA
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