EY744418 | Citrus Genome Database

Overview


Name	EY744418
Unique Name	EY744418
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	1040

Libraries


Library Name	Type
Sweet orange flower, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

BLAST of EY744418 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.411e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 131.724 bits (330), Expect = 6.784e-30
Identity = 70/77 (90.91%), Postives = 71/77 (92.21%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADLPHFSKESTLHLVLRLPWG 566
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD  +  KESTLHLVLRL  G
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY-NIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of EY744418 vs. ExPASy Swiss-Prot

BLAST of EY744418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95


Match Name	E-value	Identity	Description
UBIQ_WHEAT	1.411e-35	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	1.411e-35	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	1.411e-35	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	1.411e-35	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	1.411e-35	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	1.411e-35	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	1.411e-35	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	1.411e-35	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	1.411e-35	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	1.411e-35	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C5-003-008-D07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY744418 ID=EY744418; Name=EY744418; organism=Citrus sinensis; type=EST; length=1040bp
CCCGCGTCCGCTTCACCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCG
GATTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCG
CGGCGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCC
TGGAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCGAAGATCCAG
GACAAGGAAGGGATCCCCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAA
GCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAACATCCAGAAGGAAT
CCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAATGCAGATCTTCGTC
AAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGACAC
GATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGG
ACCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACT
CTCGCCGATTTACCACATTTCTCAAAGGAGTCCACTCTCCACCTTGTCCT
CCGTCTCCCGTGGGGGGGACTTCTAATAATTTAAATGGTGGATGGGTCCG
CTTTTGATTGGATGGCGCCTATAATACTTAATTAAGTTTGGATCGGGGGG
CTTTGCTTTTAATTTTTTTTGGTAATTTCAAATGGGGTAGGGGGCCCACC
CGCTTGGGGGCCTTAATTTCCTCCTTTCTATGGGGAAATAAACAAATATA
AGCCACTAGTTTTTTGAACCAACCACCAAACGAAAGCATGAGCACACAGA
AAAACAACCAATGCATAATATTCTTCAGCGGCCAACCCCGCGCTCCACCC
GCCGGCACTCCCCCACCCCTCCTCCCCTACTTACCCCCCCGGGGGGGCCG
CCGCCCTCTCTACCACCCCCCTGTCTCTTTACATATTCTCCCGGGACGGT
CGGGACAAGTATTAACATTTCTCCTTTCTTTAATTAGGTTACCACCACCT
CAGATCAGCATTTTTTTTCCTTTCCCCCGGGCGCCCGCCG