EY744410

Overview
NameEY744410
Unique NameEY744410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1014
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744410 vs. ExPASy Swiss-Prot
Match: RING3_ARATH (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.474e-21
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 1 
Query:  268 VEDADCKTQASS-----LIASPRKSEVSQL-NVFAASEEEDTCPICLEEYDTENPKLITKCEHHFHLSCILEWNERSESCPICDQEMIFDHT 525
            + D D K + SS     ++ S  KS ++   N++  SE+ED CP CLEEY +ENPK++TKC HHFHLSCI EW ERSE+CP+C + M F+ T
Sbjct:  139 LSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230
The following BLAST results are available for this feature:
BLAST of EY744410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RING3_ARATH9.474e-2151.09E3 ubiquitin-protein ligase At3g02290 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-C10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744410 ID=EY744410; Name=EY744410; organism=Citrus sinensis; type=EST; length=1014bp
CCACGCGTCCGCGGACGCGTGGGCTATTGTCCACCAGCTCTGGAAGAGCG
GGAGTCGTTAACATCTCACAATGGCACAGCCTCTACATTCACAAGAGGAC
TCCTGGTTGATTTCCATCTGGAAGCATCTACACCTGACACTTTCCGGGCC
CCACCCTTACCTTTGCCATACTATGTTGTTTTTGGTTGCCCACCCTCAAC
AGACTCAGAATCCGTTGGAGAAACTGTCAGTGGTGGTAGTTTTGAAACAT
TAGCTATGTGTGAAGTTGTTGAGGATGCAGACTGCAAAACTCAAGCTAGT
TCTTTGATTGCTTCACCAAGGAAGTCTGAAGTTTCACAATTGAATGTATT
TGCAGCATCCGAAGAGGAGGACACTTGTCCCATTTGCCTTGAAGAGTATG
ATACAGAGAATCCAAAACTTATCACAAAATGTGAACATCATTTCCACCTA
TCTTGCATTTTGGAGTGGAATGAAAGAAGTGAATCCTGCCCCATATGTGA
TCAGGAAATGATATTTGATCATACCTTTAATTAGTAGCAAGTCTACTTAA
AGATGGGAGTTTCCTTGCTATCTGAAATGATGGCTTGCTGGTTTATAAAA
TTGCCGATGCATGTCAGTTTTTGGTTCCTTGGAAAAACGACAGAAGGGTG
TTGACGGAATCCCTTTTGCTTTTAAGGTCTAAATTAATTTGAAAGGATCC
CACTGTTTTCAAAAATGCTTATTTGTGCCACAGCGTCCACCCCCACAAGG
GCAGGGGGCCAACGTCTTTGAGAAACACCTGCCTCGGGCGACTATTTGCA
AACCCCTTACAAATTGCGAGGGGGGAGGGAGCCGCGGAGGTTTTCCCCCT
GGAAAAAAATACTAAAACACAGCCCACATGGCCCTACGACTCACACACAA
ATCCTCATACACAACTACCTTTCTCTCCCCCCTTCAGTATACACGGGGGT
AGCACACAACCACTGTCACCTACCTTGACCGCAAACGGCCTTTTCCCACG
ATCCATATTACTCA
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