EY663177

Overview
NameEY663177
Unique NameEY663177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.221e-70
Identity = 132/217 (60.83%), Postives = 160/217 (73.73%), Query Frame = 2
Query:   11 EENVMHHFGNPNFELSRHDVVEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINHGNPGEFTMLELARVLQRYI 661
            + NV H  G+ NFEL  HDVVEPL IE DQIYHLA  ASP +Y  NP KT+KTN +GTLNMLGLAKRVGAR LL STSEV GDP  H Q E YWG+VNPIG R+ YDEGKR AET+   Y +  GV+ ++ARIFNT+GPRM ++DGRVV NF  QAL+ EPLT YG G  TR+FQ+ SD+V GL+ LM+     P+N GNP E T+LE A++++  +
Sbjct:  126 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLV 342          

HSP 2 Score: 22.3274 bits (46), Expect = 1.221e-70
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  724 PDISGARELLGWN*GI-IERGRPQMGHHF 807
            PDI  A+ +LGW   + +E G  +  H+F
Sbjct:  363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.221e-70
Identity = 132/217 (60.83%), Postives = 160/217 (73.73%), Query Frame = 2
Query:   11 EENVMHHFGNPNFELSRHDVVEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINHGNPGEFTMLELARVLQRYI 661
            + NV H  G+ NFEL  HDVVEPL IE DQIYHLA  ASP +Y  NP KT+KTN +GTLNMLGLAKRVGAR LL STSEV GDP  H Q E YWG+VNPIG R+ YDEGKR AET+   Y +  GV+ ++ARIFNT+GPRM ++DGRVV NF  QAL+ EPLT YG G  TR+FQ+ SD+V GL+ LM+     P+N GNP E T+LE A++++  +
Sbjct:  126 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLV 342          

HSP 2 Score: 22.3274 bits (46), Expect = 1.221e-70
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  724 PDISGARELLGWN*GI-IERGRPQMGHHF 807
            PDI  A+ +LGW   + +E G  +  H+F
Sbjct:  363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.221e-70
Identity = 132/217 (60.83%), Postives = 160/217 (73.73%), Query Frame = 2
Query:   11 EENVMHHFGNPNFELSRHDVVEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINHGNPGEFTMLELARVLQRYI 661
            + NV H  G+ NFEL  HDVVEPL IE DQIYHLA  ASP +Y  NP KT+KTN +GTLNMLGLAKRVGAR LL STSEV GDP  H Q E YWG+VNPIG R+ YDEGKR AET+   Y +  GV+ ++ARIFNT+GPRM ++DGRVV NF  QAL+ EPLT YG G  TR+FQ+ SD+V GL+ LM+     P+N GNP E T+LE A++++  +
Sbjct:  126 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLV 342          

HSP 2 Score: 22.3274 bits (46), Expect = 1.221e-70
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  724 PDISGARELLGWN*GI-IERGRPQMGHHF 807
            PDI  A+ +LGW   + +E G  +  H+F
Sbjct:  363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.221e-70
Identity = 132/217 (60.83%), Postives = 160/217 (73.73%), Query Frame = 2
Query:   11 EENVMHHFGNPNFELSRHDVVEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINHGNPGEFTMLELARVLQRYI 661
            + NV H  G+ NFEL  HDVVEPL IE DQIYHLA  ASP +Y  NP KT+KTN +GTLNMLGLAKRVGAR LL STSEV GDP  H Q E YWG+VNPIG R+ YDEGKR AET+   Y +  GV+ ++ARIFNT+GPRM ++DGRVV NF  QAL+ EPLT YG G  TR+FQ+ SD+V GL+ LM+     P+N GNP E T+LE A++++  +
Sbjct:  126 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLV 342          

HSP 2 Score: 22.3274 bits (46), Expect = 1.221e-70
Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  724 PDISGARELLGWN*GI-IERGRPQMGHHF 807
            PDI  A+ +LGW   + +E G  +  H+F
Sbjct:  363 PDIKKAKLMLGWEPVVPLEEGLNKAIHYF 391          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.265e-69
Identity = 129/217 (59.45%), Postives = 161/217 (74.19%), Query Frame = 2
Query:   11 EENVMHHFGNPNFELSRHDVVEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINHGNPGEFTMLELARVLQRYI 661
            + NV H  G+ NFEL  HDVVEPL IE DQIYHLA  ASP +Y  NP KT+KTN +GTLNMLGLAKRVGAR LL STSEV GDP  H Q E YWG+VNPIG R+ YDEGKR AET+   Y +  GV+ ++ARIFNT+GPRM ++DGRVV NF  QAL+ E LT YG G+ TR+FQ+ SD+V GL+ LM+     P+N GNP E ++++ AR++++ +
Sbjct:  127 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLV 343          

HSP 2 Score: 22.7126 bits (47), Expect = 2.265e-69
Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 1
Query:  724 PDISGARELLGWN*GI-IERGRPQMGHHF 807
            PDI  A+ LLGW   + +E G  +  H+F
Sbjct:  364 PDIRKAKLLLGWEPVVPLEEGLNKTIHYF 392          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.803e-68
Identity = 130/217 (59.91%), Postives = 158/217 (72.81%), Query Frame = 2
Query:   11 EENVMHHFGNPNFELSRHDVVEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINHGNPGEFTMLELARVLQRYI 661
            + NV H  G+ NFEL  HDVVEPL IE DQIYHLA  ASP +Y  NP KT+KTN +GTLNMLGLAKRVGAR LL STSEV GDP  H Q E YWG+VNPIG R+ YDEGKR AET+   Y +  GV+ ++ARIFNT+G RM ++DGRVV NF  QAL+ E LT YG G  TR+FQ+ SD+V GL+ LM+     P+N GNP E T+LE A++++  +
Sbjct:  124 KRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLV 340          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.828e-13
Identity = 62/219 (28.31%), Postives = 95/219 (43.38%), Query Frame = 2
Query:   17 NVMHHFGNPNFELSRHDV-----VEPLLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKR--VGARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINH-GNPGEFTMLELARVL 649
            N+     +P F   R D+     +E L+   D + H A               + +N+VGT  +L  A R  +G RFL  ST EV G     +     W   +P+   S Y   K  ++ L++ YH+  G+   + R  N YGPR   +  +++  F  + L    +  YGDG++ R +   SD   GL L +     G + H G   E T LEL  +L
Sbjct:   48 NLAEASADPRFSFVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHIG-RFLHVSTDEVYG-----SIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEIL 258          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 50/181 (27.62%), Postives = 82/181 (45.30%), Query Frame = 2
Query:   35 GNPNFELSRHDVVEP----LLIEDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVNGDPLQHAQKETYWGNVNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGL 562
            G+P +   R D+ +     ++   DQ+ HLA  +       +    ++TNV GT  +L  A R G A F+  ST EV G  L+H      W    P+   S Y   K + + L++ +H   G+  ++ R  N YGPR   +  +++  F    +    +  YGDG + R +    D V G+
Sbjct:   53 GHPRYRFERGDICDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGI 226          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 65/227 (28.63%), Postives = 102/227 (44.93%), Query Frame = 2
Query:   14 ENVMHHFGNPNF-----ELSRHDVVEPLLIED--DQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVNGDPLQHAQKETYWGN----VNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINH----GNPGEFTMLELAR 643
            +N+   F +PNF     +++  D+V  LLI +  D I H A      +   N  +  K N+ GT  +L   K  G   RF+  ST EV G+  + A    +  +     NP      Y   K  AE L M Y R  G+     R  N YGP    +  +++  F   A+  +PL  +GDG + RS+ +  D+ E   +++   H+G I H    G   E  ++++AR
Sbjct:   50 KNLDPSFSSPNFKFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL---HKGEIGHVYNVGTKRERRVIDVAR 265          
BLAST of EY663177 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.515e-11
Identity = 60/202 (29.70%), Postives = 91/202 (45.05%), Query Frame = 2
Query:   38 NPNF-----ELSRHDVVEPLLI--EDDQIYHLACTASPGHYKCNPDKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVNGDPLQHAQKETYWGN----VNPIGVRS*YDEGKRTAETLSMDYHRGAGVKAKIARIFNTYGPRMCIDDGRVVCNFAAQALRKEPLTAYGDGKHTRSFQFGSDMVEGLMLLMDGVHEGPINH 604
            +PNF     +++  D+V  LLI  E D I H A      +   N  +  K N+ GT  +L   K  G   RF+  ST EV G+  + A    +  +     NP      Y   K  AE L M Y R  G+     R  N YGP    +  +++  F   A+  +PL  +GDG + RS+ +  D+ E   +++   H+G +NH
Sbjct:   56 SPNFKFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL---HKGEVNH 246          
The following BLAST results are available for this feature:
BLAST of EY663177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
UXS1_RAT1.221e-7060.83UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB1.221e-7060.83UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE1.221e-7060.83UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN1.221e-7060.83UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_XENTR2.265e-6959.45UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
UXS1_DANRE1.803e-6859.91UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
ACBB_ACTS52.828e-1328.31dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (... [more]
STRE_STRGR3.127e-1227.62dTDP-glucose 4,6-dehydratase OS=Streptomyces grise... [more]
RHM2_ARATH1.188e-1128.63Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
RHM3_ARATH4.515e-1129.70Probable rhamnose biosynthetic enzyme 3 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-052-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY663177 ID=EY663177; Name=EY663177; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGAAGAAAACGTGATGCACCACTTTGGTAACCCGAATTTTG
AGCTCAGCAGACACGACGTCGTCGAGCCTCTCTTGATTGAAGACGACCAA
ATCTACCATCTCGCTTGTACCGCATCTCCAGGTCATTACAAATGCAACCC
CGACAAGACTATTAAGACGAATGTGGTGGGAACATTGAACATGCTTGGAT
TGGCGAAGAGAGTGGGAGCGAGGTTCTTATTAACGAGTACCAGCGAAGTG
AACGGGGACCCTCTTCAGCATGCACAGAAGGAGACTTACTGGGGCAACGT
CAATCCTATCGGCGTCCGAAGCTGATACGATGAGGGAAAGCGAACTGCTG
AAACGTTGAGCATGGACTACCACAGAGGAGCTGGCGTGAAAGCTAAGATT
GCTAGAATTTTCAACACTTATGGACCCCGTATGTGTATCGATGATGGTCG
CGTAGTCTGTAATTTTGCTGCTCAGGCTCTAAGGAAGGAGCCGCTGACTG
CATATGGAGATGGGAAGCATACTAGGAGTTTCCAATTTGGATCTGATATG
GTGGAGGGGCTGATGCTCCTCATGGACGGAGTACATGAGGGACCTATTAA
TCATGGGAATCCGGGTGAATTTACCATGCTTGAACTGGCTCGAGTGCTCC
AGAGATACATCTGACCCTATGCTTAAATAGGAGTTCAGGCCTGACACTGG
ACATGATCCACTCTTCAGGGAGCCCTGATATCTCAGGGGCTAGAGAGCTC
CTGGGTTGGAACTAAGGGATCATTGAGCGAGGGCGGCCCCAGATGGGCCA
TCATTTCGGCATAGAATCTTGGGGACGCAAGGAAGTGGGGGGGGGGCCAC
CCCGAACTGCGTCATCGGGGAACATGGGCCCTGGCCTCTTAAGGGTTCAC
GGAAGGGAAATGTTGGGT
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