EY744391

Overview
NameEY744391
Unique NameEY744391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744391_ssr119 microsatellite EY744391_ssr119:119..133. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY744391 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.643e-13
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  151 MARSFSNAKLFSALVADGISNAIYKRGYSAASQXXXXXXXXXXXXXXXMLKKPAEEMTGSSEKVSWVPDPVTGVYRPGESRQ 396
            MARSF+N K+ SALVADG SN   + G++AA+                M+ K  EE     EKVSWVPDPVTG YRP  + +
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNE 82
The following BLAST results are available for this feature:
BLAST of EY744391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ARG2_PHAAU5.643e-1346.34Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744391 ID=EY744391; Name=EY744391; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGGGGGATTTTCGCGCTACCAAGAGGGAAGTTTCTTTAGCT
GCTGCTGAAGGCTTTTCGCCAGAAAGAAAAGAAGGAAATTGCTTTCTGCA
GCAGCGTTAAGATCTCTTATCATCATCATCATCCCACATAACTAAGAAAA
ATGGCTCGCTCTTTCTCAAACGCTAAGCTTTTCTCTGCTCTCGTCGCTGA
CGGAATCTCTAACGCCATCTACAAAAGAGGATACTCGGCGGCATCACAAG
GCGCTGTGTCGCGGGCAACAGGGGGAGCTAGGAGTGCTGCTGCGATGTTG
AAGAAACCAGCAGAAGAGATGACAGGATCCAGTGAGAAGGTCTCGTGGGT
CCCAGACCCAGTCACTGGTGTCTACAGGCCCGGAGAATCTCGCCAACGAG
CTCGATGGGGCCGACCTCAGAGCCATGTTCTTGAACCACAACAACTGATC
ATCAAAATTAATAAGTATTATTATTAATATATATTGCTCCGGGACTGGAA
ACCTGAGGAAGGACGAAGGAAAAATTAAAAGAAGGTTACAAAGGGATTCG
TTCCTCACGGGGACACCCAAATGCACTCTCAAAGGAATCCCAGGCAAATT
GAAGAAACAAGCTGCAATAACCAAGGTTCTCTCGGGTATAAACTAGAAGG
ATCAAAAAGAAAACATACCAACACCCAGGACGCACTCCGCGGCTATACGA
AAGCCGCGACTGCGCAGCCAACCGAAGACAACCTACCTTAACCACACCCA
CCCCACACAAAAGCAGAACAAACACCGGACGGAGGGATGCCAAACCGAGT
ACCCGAACCACAAACCAAACCGCCAGGCTCAGGCATCTAACGGCGACACG
ACATGTGATACGCAACCACCACGTCTCTGAACAGGAACTGACTGTAGCCG
CACTAGTCACCCCCAATTGGAAACACGCAGCGGGAAGTAAGGACGCTCCC
CACAGGAGGGCCGGCCCTGAACGTCGCGGGAACGAGCCGGATGCACACCT
GAACGGACACCCCGTCTAACACA
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