EY744390

Overview
NameEY744390
Unique NameEY744390
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length970
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT4_ARATH (Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 7.910e-86
Identity = 162/188 (86.17%), Postives = 163/188 (86.70%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT12_ARATH (Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 7.910e-86
Identity = 162/188 (86.17%), Postives = 163/188 (86.70%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.033e-85
Identity = 161/191 (84.29%), Postives = 163/191 (85.34%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGLYRC 678
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT IMFETFN PAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L  C
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI-LRLDLAGRDLTDC 190
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 1.033e-85
Identity = 161/191 (84.29%), Postives = 163/191 (85.34%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGLYRC 678
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT IMFETFN PAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L  C
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI-LRLDLAGRDLTDC 190
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT1_SORBI (Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.033e-85
Identity = 162/188 (86.17%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.033e-85
Identity = 162/188 (86.17%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 1.033e-85
Identity = 162/188 (86.17%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 3.006e-85
Identity = 161/188 (85.64%), Postives = 162/188 (86.17%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFN PAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT3_PEA (Actin-3 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 3.006e-85
Identity = 161/188 (85.64%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MA+AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
[Close]
BLAST of EY744390 vs. ExPASy Swiss-Prot
Match: ACT1_TOBAC (Actin OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 3.006e-85
Identity = 161/188 (85.64%), Postives = 163/188 (86.70%), Query Frame = 1 
Query:  106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTPIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLGLWKRCYPHCPHL*GLCPSQTLSFVLDLAGRGL 669
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFNTPAMYVAIQAVLSLYASGRTTGIVL          P   G      +   LDLAGR L
Sbjct:    1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDL 187
The following BLAST results are available for this feature:
BLAST of EY744390 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 450
Match NameE-valueIdentityDescription
ACT4_ARATH7.910e-8686.17Actin-4 OS=Arabidopsis thaliana GN=ACT4 PE=1 SV=1[more]
ACT12_ARATH7.910e-8686.17Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=... [more]
ACT3_ORYSJ1.033e-8584.29Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI1.033e-8584.29Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT1_SORBI1.033e-8586.17Actin-1 OS=Sorghum bicolor GN=AC1 PE=2 SV=1[more]
ACT1_ORYSJ1.033e-8586.17Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]
ACT1_ORYSI1.033e-8586.17Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2... [more]
ACT_GOSHI3.006e-8585.64Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT3_PEA3.006e-8585.64Actin-3 OS=Pisum sativum PE=2 SV=1[more]
ACT1_TOBAC3.006e-8585.64Actin OS=Nicotiana tabacum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-008-B02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744390 ID=EY744390; Name=EY744390; organism=Citrus sinensis; type=EST; length=970bp
TTCATTTCTTAGATTTTGAATTGAACCCCAGGGCCAAGGGCGGGCTGCTG
AGATCGGAGTCTCCTCTCCCCAAATTATCTGTTAATCTTACCCTGGTGAT
AGAAGATGGCAGACGCTGAGGATATTCAGCCACTCGTCTGTGACAATGGA
ACAGGAATGGTTAAGGCTGGATTTGCGGGTGACGATGCTCCAAGGGCTGT
GTTCCCTAGCATTGTAGGTCGCCCACGCCACACTGGTGTAATGGTTGGCA
TGGGTCAAAAAGATGCCTATGTTGGGGATGAGGCTCAGTCCAAGCGTGGT
ATTTTAACACTGAAATACCCAATTGAGCATGGTATTGTGAACAACTGGGA
CGACATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCGTGTAG
CCCCAGAAGAACACCCTGTATTGCTCACTGAAGCACCTCTCAACCCGAAG
GCCAATCGTGAGAAGATGACCCCGATTATGTTTGAGACCTTTAATACTCC
TGCTATGTATGTGGCCATCCAGGCGGTTCTCTCCCTTTATGCCAGTGGCC
GTACAACTGGGATTGTTTTGGGACTCTGGAAACGGTGTTACCCCCACTGT
CCCCATTTATAAGGGCTATGCCCTTCCCAAACCCTATCTTTCGTCCTTGA
CCTTGCAGGTCGTGGCCTTTACCGATGCCCTTAATGAAAATCTGTGCTGG
AGCCGGGGGTAATTTCCTTGGCTACCACGCGCTAAAGGTAATAAATTGTC
GAGGGGTCATAAAAGGCACAAAGCTTGGCTATATTTGCCCCTTTCTTTCT
GGGAAAAAGGACTCGAGACCTCTGGACACAAAACCCTCCTTGAGAATTTA
CAAACACATCATAATCAATTGGGCCACATAAGGCGAACCGACAACTGCCA
ACCTCGTCGGGGCTGGAGACAACTTACACAACACGCACTACGGAGACACT
CCTCTTTCTCACCCACGCCA
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