EY744364

Overview
NameEY744364
Unique NameEY744364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length957
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744364_ssr634 microsatellite EY744364_ssr634:634..649. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.727e-69
Identity = 123/195 (63.08%), Postives = 154/195 (78.97%), Query Frame = 3
Query:   12 ITNEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPXTVSASFTRASLNLARMVPLMYSYDDNQRLPSLEHFIKS 596
            IT EIS K+YK HG+NP  +LR +W SLCKAFLVEAKWF SG++P +EEY+KNG+ SSGVH+ ++H + LLG  +T+E VELI+SNP I+SS ATILRLWDDLGSAKDENQDG DGSY+  Y+ E++ S  +EA+     KIS AWKRLN+ECL P   S SF++A LN+AR VPLMYSYDD+QRLP  + ++KS
Sbjct:  375 ITTEISMKIYKSHGWNPTYALRQSWASLCKAFLVEAKWFNSGYLPTTEEYMKNGVVSSGVHLVMLHAYILLGEELTKEKVELIESNPGIVSSAATILRLWDDLGSAKDENQDGTDGSYVECYLNEYKGSTVDEARTHVAQKISRAWKRLNRECLNPCPFSRSFSKACLNIARTVPLMYSYDDDQRLP--DEYLKS 567          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.342e-28
Identity = 68/187 (36.36%), Postives = 105/187 (56.15%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPXTVS--ASFTRASLNLARMVPLMYSYDDNQRLP 572
            N+I Y V +  G N +  L+  WT L K FL E+KW+ +GH P  EEY++NG+ SS V   L+H+F +L   I+++T+     N +++ S ATILRL +DL ++ +E   G     +  YM E R ++ EEA++   + ISD+W  +N +     T S    F  A+ NL R+V  +Y + D    P
Sbjct:  396 NQIGYDVLRDKGLNVIPYLKQVWTDLFKTFLTESKWYKTGHKPSFEEYMQNGVISSSVPTILLHLFSVLSDHISDQTLTDDSKNHSVVRSCATILRLANDLATSTEEMARGDSPKSVQCYMYETR-ASEEEARRHMQSMISDSWDIINSDLKTAHTSSLPRGFLAAAANLNRVVQCIYRHGDGHGSP 581          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.644e-27
Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKECLCPXTVSASFTRASLNLARMVPLMYSYDDN 560
            NE++Y   +  G+N    LR AW  L +++L+EAKW+  GH P  EEY+KN   S G    L H+FF L   I EE  E +     I+ ++ TILRL DD+G++ DE + G     +  YM E + ++ EEA++   + I   WK +NKE +   + S  F + S NLARM   +Y ++ +
Sbjct:  391 NEMAYDTLRDKGFNSTPYLRKAWVDLVESYLIEAKWYYMGHKPSLEEYMKNSWISIGGIPILSHLFFRLTDSIEEEDAESMHKYHDIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNE-KNASEEEAREHVRSLIDQTWKMMNKE-MMTSSFSKYFVQVSANLARMAQWIYQHESD 569          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 5.262e-26
Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAIN-KISDAWKRLNKECLCPXTVSASFTRASLNLARMVPLMYSYDDNQRLPSLE 581
            NE++    K+  ++ ++ L+ AW  LC+ +LVEAKW+++ + P  +EY++N   S G    LVH +F + + IT+E ++ ++  P II  ++ I RL DDLG++ DE + G     I  YM E    A+EE  +  I   IS  WK++NK+       S  F   +LNLARM   +Y + D   L + E
Sbjct:  393 NEMALDTMKEQRFHIIKYLKKAWVDLCRYYLVEAKWYSNKYRPSLQEYIENAWISIGAPTILVHAYFFVTNPITKEALDCLEEYPNIIRWSSIIARLADDLGTSTDELKRGDVPKAIQCYMNE--TGASEEGAREYIKYLISATWKKMNKDRAASSPFSHIFIEIALNLARMAQCLYQHGDGHGLGNRE 579          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.887e-24
Identity = 67/182 (36.81%), Postives = 98/182 (53.85%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVE-LIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAIN-KISDAWKRLNKECLCPXTVSASFTRASLNLARMVPLMYSYDD 557
            NE++Y V ++H +  V+ L+N+W  LC+ +L EAKWF SG+ P  ++Y++N   S G  +  V+ FF L   IT E +E L + + A     + +LRL DDLG+  DE + G     I  YM  H   A+E+  +  I   IS+ WK +N E       S  F +A  NL RM   MY + D
Sbjct:  413 NEMAYDVLEEHNFVTVEYLKNSWAELCRCYLEEAKWFYSGYKPTLKKYIENASLSIGGQIIFVYAFFSLTKSITNEALESLQEGHHAACRQGSLMLRLADDLGTLSDEMKRGDVPKSIQCYM--HDTGASEDEAREHIKFLISEIWKEMNDEDEYNSIFSKEFVQACKNLGRMSLFMYQHGD 592          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.871e-23
Identity = 69/188 (36.70%), Postives = 101/188 (53.72%), Query Frame = 3
Query:    3 TRPITNEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVE-LIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAE-EAQKSAINKISDAWKRLNKE-CLCPXTVSASFTRASLNLARMVPLMYSYDD 557
            T   TNE+++ V ++HG+  ++  +     LCK  L EAKWF SG+ P  +EY++NG  S G  V L+H +F   + +T+E +E L D +P I+   + ILRL DDLG+  DE + G     I  YM  H   A+E EA++     IS++WK +N E        S  F +   NL R    +Y Y D
Sbjct:  414 TYNFTNELAFDVLQEHGFVHIEYFKKLMVELCKHHLQEAKWFYSGYKPTLQEYVENGWLSVGGQVILMHAYFAFTNPVTKEALECLKDGHPNIVRHASIILRLADDLGTLSDELKRGDVPKSIQCYM--HDTGASEDEAREHIKYLISESWKEMNNEDGNINSFFSNEFVQVCQNLGRASQFIYQYGD 599          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.169e-23
Identity = 66/188 (35.11%), Postives = 103/188 (54.79%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDS-NPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINK--ISDAWKRLNKECLCPXTVSASFTRASLNLARMVPLMYSYDDNQRLP 572
            N+I Y V +  G+N +  L+ +W  +C  FL EAKW+ SG+ P  EEY++NG  SS V   L+H+F LL    +++T++++ S N +++ S+ATILRL +DL ++ +E   G     +  +M E   + A EA+  A  +  I  AW  LN E      +   F  A+ NL R+   +Y Y D    P
Sbjct:  366 NQIGYFVLRDKGFNVIPYLKESWADMCTTFLKEAKWYKSGYKPNFEEYMQNGWISSSVPTILLHLFCLL----SDQTLDILGSYNHSVVRSSATILRLANDLATSSEELARGDTMKSVQCHMHE---TGASEAESRAYIQGIIGVAWDDLNME-KKSCRLHQGFLEAAANLGRVAQCVYQYGDGHGCP 545          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.529e-22
Identity = 67/191 (35.08%), Postives = 108/191 (56.54%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLG-HGITEETVELIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAI-NKISDAWKRLNKECLCPXT-VSASFTRASLNLARMVPLMYSYDDNQRLPSLE 581
            NE +Y V K+  ++ + S++NAW  L +A+LVEAKW+ S + P+ EEYL+NG+ S      ++ I +L G + I ++ +E ++SNP I+  ++ I RL DDLG++ DE Q G     I  YM  H   A+EE  +  I + +   WK++N       + ++ + T   LNL RM   MY + D   + + E
Sbjct:  389 NEFAYYVLKQQDFDLLLSIKNAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSI-TGPLIITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYM--HETGASEEVARQHIKDMMRQMWKKVNAYTADKDSPLTGTTTEFLLNLVRMSHFMYLHGDGHGVQNQE 576          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.529e-20
Identity = 60/190 (31.58%), Postives = 95/190 (50.00%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVELIDSN-PAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINK-ISDAWKRLNKECLCPXTVSA---SFTRASLNLARMVPLMYSYDDNQRLP 572
            N I   + K    + +  L+ +W  LC+ +LVEAKW+  G+ P  EEY++N   S      L+H + +    I+ + +E +  +   I+  +AT+LRL +DLG++  E   G     +  YM  H   A+EE  +  +++ ISD W  +N E       S+    F  A++NLARM   MY Y D    P
Sbjct:  388 NGIGCDILKYKKIDVIPYLKKSWADLCRTYLVEAKWYKRGYKPSLEEYMQNAWISISAPTILIHFYCVFSDQISVQNLETLSQHRQHIVRCSATVLRLANDLGTSPTELARGDVLKSVQCYM--HETGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCP 575          
BLAST of EY744364 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19
Identity = 59/190 (31.05%), Postives = 89/190 (46.84%), Query Frame = 3
Query:   18 NEISYKVYKKHGYNPVQSLRNAWTSLCKAFLVEAKWFASGHMPESEEYLKNGIESSGVHVALVHIFFLLGHGITEETVE-LIDSNPAIISSTATILRLWDDLGSAKDENQDGKDGSYIHYYMKEHRYSAAEEAQKSAINKISDAWKRLNKE----CLCPXTVSASFTRASLNLARMVPLMYSYDDNQRLP 572
            N +   V K    + +   + +W  LCKA+LVEAKW+  G+ P  EEY++N   S      L+H +      I+ + +E L+     ++  +AT+LRL +DL ++ DE   G     +  YM E   S  EEA+      IS  W  +N E          +S  F   ++NLARM   MY + D    P
Sbjct:  390 NAMGCDVLKCKNIDVIPYFKKSWADLCKAYLVEAKWYKGGYKPSVEEYMQNAWISISAPTMLIHFYCAFSGQISVQILESLVQQQQDVVRCSATVLRLANDLATSPDELARGDVLKSVQCYMHETGVS-EEEARTHVQQMISHTWDEMNYEARTAARSSSLLSRRFVETAMNLARMSQCMYQHGDGHGCP 578          
The following BLAST results are available for this feature:
BLAST of EY744364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
LINS_ARATH1.727e-6963.08Linalool synthase, chloroplastic OS=Arabidopsis th... [more]
TPS02_ARATH7.342e-2836.36Probable terpenoid synthase 2, chloroplastic OS=Ar... [more]
SCS_SALOF3.644e-2737.021,8-cineole synthase, chloroplastic OS=Salvia offi... [more]
MYRS_QUEIL5.262e-2634.92Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA2.887e-2436.81(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA1.871e-2336.70(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
OCIS_ARATH4.169e-2335.11(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
RLC1_CITLI3.529e-2235.08(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
CINS_ARATH2.529e-2031.581,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH3.652e-1931.05Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-G09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744364 ID=EY744364; Name=EY744364; organism=Citrus sinensis; type=EST; length=957bp
CCACGCGTCCGATTACTAACGAAATAAGCTACAAGGTCTATAAGAAGCAT
GGGTATAACCCAGTACAGTCCCTCCGAAATGCGTGGACAAGTTTGTGCAA
AGCATTTCTAGTAGAAGCCAAATGGTTTGCTTCTGGACACATGCCTGAGT
CTGAAGAATACTTGAAGAATGGGATTGAGAGTTCAGGAGTACATGTGGCA
CTGGTCCACATTTTTTTTCTCCTAGGTCATGGTATAACTGAGGAAACGGT
GGAGCTTATTGACAGTAACCCGGCCATAATATCATCAACCGCAACAATTC
TTCGGCTCTGGGATGACTTGGGAAGTGCAAAGGATGAGAATCAAGATGGT
AAGGATGGATCTTACATCCATTACTACATGAAGGAACACCGATATTCTGC
CGCCGAAGAGGCACAAAAGAGTGCTATCAATAAAATTTCAGACGCATGGA
AGCGGCTCAACAAAGAATGCCTCTGCCCANNTACGGTCTCAGCATCGTTC
ACGAGGGCTTCTCTCAATCTTGCAAGAATGGTCCCCTTGATGTACAGTTA
CGATGACAACCAACGCCTACCAAGCCTCGAACATTTCATTAAGTCCCCTA
CTCTCTGAAAAGCGTACCCCCCTGAAGGAGTTTATTAATTAATTAATTAA
TTTATCTCCTTTTCTATGAAAAAATTATGTGGGGCTCCAATAAGTTGTAA
GGAAAATAACTTTTTTTCCCNGGAATACAACGGGCTGCGCCTCCGCCCAG
CCCGCGAACGCAACATCACACTGCAGACTCACATATACCAAACCAAGGGG
GGGGGCCCCCTTAAAAAGAACCCATTTTACTAACCCCGGGATGGGAAACA
TAATACTTTTTCTAAATGGGGACCCCAAAAATTTCTTTTTCCGGGGCCGC
GGTTTTTTTAAAAGAGGCGGGGGAGGGGGGAAAAACCCCTGGGGGTATTC
CCCCACA
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