EY744353

Overview
NameEY744353
Unique NameEY744353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1027
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROYA (Ribosome biogenesis protein BOP1 homolog OS=Drosophila yakuba GN=GE11901 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.453e-24
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  E ++ VAW P P+L ++AV+ G  +L++N  +G++   ++  DLL  E P+      + + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  476 IATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVNPKVGDKVLVKKTDDLL-AEAPSQDVIESERIKTAVQWSNAEADEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQFVLFHPVKPCFFVATQHNI 640          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROME (Ribosome biogenesis protein BOP1 homolog OS=Drosophila melanogaster GN=CG5033 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.453e-24
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  E ++ VAW P P+L ++AV+ G  +L++N  +G++   ++  DLL  E P+      + + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  476 IATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVNPKVGDKVLVKKTDDLL-AEAPSQDVIESERIKTAVQWSNAEADEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQFVLFHPVKPCFFVATQHNI 640          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROER (Ribosome biogenesis protein BOP1 homolog OS=Drosophila erecta GN=GG21824 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.453e-24
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  E ++ VAW P P+L ++AV+ G  +L++N  +G++   ++  DLL  E P+      + + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  476 IATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVNPKVGDKVLVKKTDDLL-AEAPSQDVIESERIKTAVQWSNAEADEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQFVLFHPVKPCFFVATQHNI 640          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROSE (Ribosome biogenesis protein BOP1 homolog OS=Drosophila sechellia GN=GM21825 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.204e-24
Identity = 64/167 (38.32%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  E ++ VAW P P+L ++AV+ G  +L++N  +G++   ++  DLL  E P+      + + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  476 IATGRCIRTIETDEVVRCVAWCPNPKLSIIAVATGNRLLLVNPKVGDKVLVQKTDDLL-AEAPSQDVIESERIKTAVQWSNAEADEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQFVLFHPVKPCFFVATQHNI 640          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROPS (Ribosome biogenesis protein BOP1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA18610 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.322e-24
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQHDKLD---GIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL  E P      ++ + + V W   +  D   G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  478 IATGRCIRTIETEDVVRCVAWCPNAKLSIIAVATGSRLLLVNPKVGDKLLVKKTDDLL-AEAPVLDVIENERIKTAVQWANAEPADQEKGVRVIITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 642          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROPE (Ribosome biogenesis protein BOP1 homolog OS=Drosophila persimilis GN=GL17224 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.322e-24
Identity = 63/167 (37.72%), Postives = 100/167 (59.88%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQHDKLD---GIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL  E P      ++ + + V W   +  D   G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  477 IATGRCIRTIETEDVVRCVAWCPNAKLSIIAVATGSRLLLVNPKVGDKLLVKKTDDLL-AEAPVLDVIENERIKTAVQWANAEPADQEKGVRVIITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 641          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROAN (Ribosome biogenesis protein BOP1 homolog OS=Drosophila ananassae GN=GF11675 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.217e-23
Identity = 61/166 (36.75%), Postives = 99/166 (59.64%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVE--TPTAPDDNMASIVSWLQHDKLD---GIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL  E  +     + + + V W   +  +   G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  485 IATGRCIRTIETEDVVRCVAWCPNAKLSIIAVATGNRLLLINPKVGDKVLVKKTDDLLAEEPSSDVIESERIKAAVQWATAEPAEQEKGVRVVINHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 649          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROGR (Ribosome biogenesis protein BOP1 homolog OS=Drosophila grimshawi GN=GH22027 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.590e-23
Identity = 62/167 (37.13%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAP---DDNMASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL  E P++     + + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  478 IATGRCIRTIETNDVVRCVAWCPNAKLSIIAVATGTRLLLINPKVGDKLLVKKTDDLL-AEAPSSDVIESERIKTAVQWSNAEPEEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 642          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROWI (Ribosome biogenesis protein BOP1 homolog OS=Drosophila willistoni GN=GK22227 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.077e-23
Identity = 63/168 (37.50%), Postives = 101/168 (60.12%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPD----DNMASIVSWLQHDKLD---GIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL  E P+  D    + + + V W   +  +   G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  469 IATGRCIRTIETEDVVRCVAWCPNAKLSIIAVATGSRLLLVNPKVGDKLLIKKTDDLL-AEEPSNQDIIDNERIKTAVQWSTAEAAEQEKGVRVIINHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 634          
BLAST of EY744353 vs. ExPASy Swiss-Prot
Match: BOP1_DROVI (Ribosome biogenesis protein BOP1 homolog OS=Drosophila virilis GN=GJ22246 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.712e-23
Identity = 62/166 (37.35%), Postives = 98/166 (59.04%), Query Frame = 1
Query:   25 LTSGRCLRVLEIGEAIQYVAWNPLPELPVLAVSVGQDVLILNTGLGNEEEQRRVKDLLHVETPTAPDDN--MASIVSWLQ---HDKLDGIR--LRHFKMVSSVEWHRRGDYLSTVMPAGESRAIFMHQLSKKLSHRIPF-KLHGLPVSSVFHPTRSIFFVSTKKEI 498
            + +GRC+R +E  + ++ VAW P  +L ++AV+ G  +L++N  +G++   ++  DLL         DN  + + V W      ++  G+R  + HFK +  V WH RGDYL+TVMP G +R+  +HQLSK+ S +IPF K  GL    +FHP +  FFV+T+  I
Sbjct:  472 IATGRCIRTIETNDVVRCVAWCPNAKLSIIAVATGSRLLLINPKVGDKLLIKKTDDLLAASPSLDVIDNERIKTAVQWSNAEPEEQEKGVRVVITHFKPIRQVTWHGRGDYLATVMPEGANRSALIHQLSKRRS-QIPFSKSKGLIQCVLFHPVKPCFFVATQHNI 636          
The following BLAST results are available for this feature:
BLAST of EY744353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
BOP1_DROYA2.453e-2438.32Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROME2.453e-2438.32Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROER2.453e-2438.32Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROSE3.204e-2438.32Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROPS9.322e-2437.72Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROPE9.322e-2437.72Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROAN1.217e-2336.75Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROGR1.590e-2337.13Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROWI2.077e-2337.50Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]
BOP1_DROVI2.712e-2337.35Ribosome biogenesis protein BOP1 homolog OS=Drosop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-F10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744353 ID=EY744353; Name=EY744353; organism=Citrus sinensis; type=EST; length=1027bp
CCACGCGTCCGCGCATTTGGGAGGTTGACCTCTGGTCGATGTCTTAGGGT
GTTGGAGATCGGTGAAGCTATCCAATATGTAGCTTGGAATCCTTTGCCTG
AGCTTCCTGTTCTGGCTGTTTCTGTGGGACAAGATGTTCTTATTTTGAAC
ACTGGATTGGGGAACGAAGAAGAGCAAAGAAGAGTTAAGGACCTTTTGCA
TGTTGAGACTCCAACAGCACCAGATGACAACATGGCATCCATTGTGAGTT
GGCTTCAACACGACAAGCTTGATGGGATTAGATTGAGACATTTTAAGATG
GTGTCTTCGGTAGAATGGCATCGCAGGGGAGACTACCTCTCCACGGTAAT
GCCAGCTGGTGAATCAAGGGCAATTTTTATGCACCAGCTTTCTAAGAAGC
TTTCCCATAGAATCCCATTCAAGTTGCATGGACTTCCTGTATCGTCAGTA
TTTCATCCTACTCGTTCCATATTCTTTGTTTCAACAAAGAAAGAAATAAT
TTCGTGTTTATGAATCTGTTGAAGCAAAGGCTCATAACAAAGCTAGAAGA
CTGGACTAAAGGGAAGTCTCCCCAATTGCAATTCATCCTTGCTGGTGAAA
ATTCTATTTGGTTGGGGAACCAGAAGAAAGGAAATTGGGGTTGCCTTCAA
ACTGGACCCTTTCCCTCCTCACCCCTACACGGGTCCCCAACGGCTCACCC
CAAACCCCCTTACCCCCGGGGGCCCTTCCCCCCGCCCTACCCCCCCCCTA
TCTTCCGCCTGCACCTACACGCTTGAACCCCGACCGCATTTCGCCTGGCC
CCGGCCCTCTTATACCCTTTAGACCCCAAACCCCCTTCTCATATTCCCCC
CAGCGAAAACTGTCCCCGGGCCCCCGAACTCACCTCCCCGGCTGCGTACC
AGCTCTGACACCAATGTAGCATTCACTTCTCCAAACCCAAACAGCGCCAG
CCTGAGATATACTAGTAATGTAATCGCGGGCGCTGAGCTAAAATTAAGCG
AATGTAAAGCACCTCACTGAGTCTTTT
back to top