EY744345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_ARATH (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana GN=HMGCL PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 6.348e-44 Identity = 100/160 (62.50%), Postives = 114/160 (71.25%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSIP 492 P+ VKIVEVGPRDGLQNEKN VPT VKVELI+RLVSSGLPVVEATSFVSPKWVPQLADA+DVM+AV L+GARLPVLTPNLK Q S + + ++ SASE+FS SNINC+IEESL+RYR VA AAK+ S+P Sbjct: 165 PKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGF--------QAAVSAGAKEVAIF------------------ASASESFSLSNINCTIEESLLRYRVVATAAKEHSVP 298
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_CHICK (Hydroxymethylglutaryl-CoA lyase OS=Gallus gallus GN=HMGCL PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.574e-32 Identity = 79/160 (49.38%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSIP 492 P+ VK+VEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFVSP+WVPQ+AD +VM+ + L G PVLTPNLK A+V + V + +ASE F+K NINCSIEESL R+ V AA+ SIP Sbjct: 3 PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADHAEVMQGINKLPGVSYPVLTPNLKGF----------QAAVAAGAKEVSI----------------FGAASELFTKKNINCSIEESLERFSEVMNAARAASIP 136
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_BOVIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus GN=HMGCL PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.051e-30 Identity = 76/159 (47.80%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSI 489 P+ VKIVEVGPRDGLQNEKN VPT VK++LI L +GLPVVEATSFVSPKWVPQ+AD +V++ ++ G PVLTPN F+ A+V + V + +ASE F+K NINCSI+ESL R+ + +AA+ I Sbjct: 30 PKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFVSPKWVPQMADHAEVLKGIQKFPGVNYPVLTPN----------FKGFQAAVAAGAKEVAIFG----------------AASELFTKKNINCSIDESLQRFDEILKAARAAGI 162
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGC2_MOUSE (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Mus musculus GN=Hmgcll1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.059e-30 Identity = 76/160 (47.50%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSIP 492 P VKIVEVGPRDGLQNEK VPT +K+ELI +L +GL V+E TSFVS +WVPQ+AD +VM +R G R PVLTPNL+ FQ A+ ++ + V+ +ASE+FSK NINCSIEES+ R++ V +A+ + IP Sbjct: 45 PEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWVPQMADHAEVMRGIRQYPGVRYPVLTPNLQG-------FQHAVAAG-ATEIAVF------------------GAASESFSKKNINCSIEESMGRFQEVISSARHMDIP 178
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGC2_HUMAN (Probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 OS=Homo sapiens GN=HMGCLL1 PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 3.059e-30 Identity = 73/160 (45.62%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSIP 492 P VKIVEVGPRDGLQNEK VPT +K+E I RL +GL V+E TSFVS +WVPQ+AD +VM+ + G R PVLTPNL Q H +V + + + +ASE+FSK NINCSIEES+ ++ V ++A+ ++IP Sbjct: 75 PEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRWVPQMADHTEVMKGIHQYPGVRYPVLTPNL----------QGFHHAVAAGATEISV----------------FGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIP 208
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_RAT (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus GN=Hmgcl PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.217e-30 Identity = 74/159 (46.54%), Postives = 100/159 (62.89%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSI 489 P+ VKIVEVGPRDGLQNEK+ VPT VK++LI L +GLPV+EATSFVSPKWVPQ+AD DV++ ++ G PVLTPN+K F++ A+ + + ++ +ASE F++ N+NCSIEES R+ V +AA+ SI Sbjct: 30 PKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFVSPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKG-------FEEAVAAG-AKEVSIF------------------GAASELFTRKNVNCSIEESFQRFDGVMQAARAASI 162
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_MACFA (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca fascicularis GN=HMGCL PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 9.839e-29 Identity = 73/159 (45.91%), Postives = 95/159 (59.75%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSI 489 P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+EATSFVSPKWVPQ+AD +V++ ++ G PVL PNLK A+V + V + +ASE F+K N+NCSIEES R+ A+ +AA+ +I Sbjct: 30 PKQVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIEATSFVSPKWVPQMADHAEVLKGIQKFPGITYPVLIPNLKGF----------EAAVAAGAKEVSI----------------FGAASELFTKKNVNCSIEESFQRFDAILKAAQSANI 162
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_HUMAN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens GN=HMGCL PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 9.839e-29 Identity = 73/159 (45.91%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSI 489 P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSFVSPKWVPQ+ D +V++ ++ G PVLTPNLK A+V + V + +ASE F+K NINCSIEES R+ A+ +AA+ +I Sbjct: 30 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGF----------EAAVAAGAKEVVI----------------FGAASELFTKKNINCSIEESFQRFDAILKAAQSANI 162
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_PONAB (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii GN=HMGCL PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.285e-28 Identity = 73/159 (45.91%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSI 489 P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSFVSPKWVPQ+ D +V++ ++ G PVLTPNLK A+V + V + +ASE F+K NINCSIEES R+ A+ +AA+ +I Sbjct: 30 PKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGF----------EAAVAAGAKEVAI----------------FGAASELFTKKNINCSIEESFQRFDAILKAAQSANI 162
BLAST of EY744345 vs. ExPASy Swiss-Prot
Match: HMGCL_MOUSE (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus GN=Hmgcl PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.285e-28 Identity = 73/159 (45.91%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 13 PRSVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLRVYLXXXXXXXXXXXXXXXXXXSASEAFSKSNINCSIEESLVRYRAVARAAKDLSI 489 P+ VKIVEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFVSP WVPQ+AD DV++ ++ G PVLTPN+K F++ A+ + + V+ + SE F++ N NCSIEES R+ V +AA+ SI Sbjct: 30 PKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATSFVSPNWVPQMADHSDVLKGIQKFPGINYPVLTPNMKG-------FEEAVAAG-AKEVSVF------------------GAVSELFTRKNANCSIEESFQRFAGVMQAAQAASI 162 The following BLAST results are available for this feature:
BLAST of EY744345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744345 ID=EY744345; Name=EY744345; organism=Citrus sinensis; type=EST; length=1042bpback to top |