EY744340

Overview
NameEY744340
Unique NameEY744340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 3.056e-61
Identity = 110/134 (82.09%), Postives = 117/134 (87.31%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K+++AKY
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.808e-61
Identity = 110/134 (82.09%), Postives = 117/134 (87.31%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K+++AKY
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 1.161e-60
Identity = 110/134 (82.09%), Postives = 116/134 (86.57%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K+++ KY
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.517e-60
Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K+++AKY
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.517e-60
Identity = 110/134 (82.09%), Postives = 116/134 (86.57%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS+SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K+++ KY
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 5.395e-58
Identity = 103/134 (76.87%), Postives = 116/134 (86.57%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGP +SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K++++KY
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.613e-56
Identity = 100/134 (74.63%), Postives = 111/134 (82.84%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP+DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPA               DPNPDDPL PEIA ++K+++ KY
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.506e-55
Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP++SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPA               DPNPDDPL PEIA ++K+++ KY
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.195e-51
Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MA KRI KEL DLQ+DPP  CSAGPV +D+FHWQATIMGP+DSPY GGVF +TIHFP DYPFKPPKVAF TK++HPNINSNGSICLDIL+ QWSPA               DPNPDDPL PEIA  +K+++ KY
Sbjct:    1 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKY 134
[Close]
BLAST of EY744340 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.891e-51
Identity = 91/134 (67.91%), Postives = 104/134 (77.61%), Query Frame = 3 
Query:  180 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPAXXXXXXXXXXXXXXXDPNPDDPLEPEIAPLHKSEQAKY 581
            MA KRI KEL DL +DPP  CSAGPV +DMFHWQATIMGP+DSPY GGVF +TIHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPA               DPNPDDPL PEIA ++K+++ KY
Sbjct:    1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 134
The following BLAST results are available for this feature:
BLAST of EY744340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
UBC28_ARATH3.056e-6182.09Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC4_SOLLC6.808e-6182.09Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC9_ARATH1.161e-6082.09SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC8_ARATH1.517e-6081.34Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC10_ARATH1.517e-6082.09Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC11_ARATH5.395e-5876.87Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH8.613e-5674.63Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH2.506e-5572.39Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UB2D4_HUMAN2.195e-5168.66Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]
UB2D2_XENLA4.891e-5167.91Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laev... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-E09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744340 ID=EY744340; Name=EY744340; organism=Citrus sinensis; type=EST; length=979bp
TTTGTGTTGAAGAAAACGAAGCAAGGGGTTGATAGAGGAGCGAGGCGGGG
GCGGCTTGACGACCTAGATCTGCTTCACCGTTTCGCTTTCTCGACGCTAT
CGCTCTCCGATCCTGTTCTCTGCCGCGCAAGGTCTTAAGGTTCGTTGTAG
TTTCAATTTTAATAATCCCCTGAAGAGTCATGGCTTCAAAGCGTATTTTG
AAGGAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCTGG
CCCTGTGGCTGAAGACATGTTCCACTGGCAAGCAACAATTATGGGCCCTT
CTGATAGCCCATATGCAGGAGGTGTATTTTTAGTTACCATTCATTTTCCT
CCTGATTATCCTTTCAAGCCCCCAAAGGTTGCTTTTAGGACCAAGGTCTT
CCACCCGAACATCAACAGCAATGGAAGCATCTGTCTTGATATCCTTAAAG
AACAGTGGAGTCCAGCGCTTACCATTNNCCCCCNNCTGCTCTCTATCTGC
TCCTTGCTTACTGATCCAAATCCTGACGACCCTCTTGAACCGGAAATTGC
CCCACTGCACAAGTCCGAACAAGCCAAATATGGAATCCACCGCCCGAAAC
TGGACACCAAAAGGAATGCAATGGAAACGAGGGTTGTTACGAAATTGCAC
AAAAAAGAGAAACCTTTAATTGAAATATGCTGGAGAGGCGTGGACCAACA
AATTTTCACTGAACATGGCTTTGCGGAAGAGGAAGACGATGGGGCGACCA
TAAAGAAGTGGGCGTGGCGAAATCGAGACGGGTACCCCCACCTAACTGCG
TAGAACCGCGAGCATACTCGGCACCTTCACAGACACTACATCTCGCAACA
AACACTGAAACCGCACCTGTCGTGAACACCAGCTTTCAAACCATGCCTCC
ACCACATAATAGCCCTTTCAAACTTTCTCATCAAACAACACCTACAACTG
GACACCACATATAACAACTCGTAAAAGCA
back to top