EY744339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD2_ARATH (Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.255e-19 Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 325 MAETGSAAATDFPLKRPRDDGEKEANNNNNGSVLMEMDSN----KQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 M+ T A+ TD P+KRPR EA +NNG ME ++ K+P C+SS+IPGW I+PMWPGEAHSLK EKILFQG+S Q+V VF S+ G+ G LT + CA+ +++ L C Sbjct: 1 MSSTQEASVTDLPVKRPR-----EAEEDNNGGA-METENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSA-TYGKVLVLDGVIQLTERD-ECAYQEMITHLPLC 120
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.299e-16 Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 352 TDFPLKRPRDD-GEKE---ANNNNNGSVLMEMDSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 T+ P+KRPR++ E E ANN+NNG + + ISSV+PGW I+P+WPGEAHSLK EKILFQG+S QNV VF SS G+ G LT + CA+ +++ L C Sbjct: 12 TELPVKRPREEEAETEMEAANNSNNGC-----EKEESSPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSS-TYGKVLVLDGVIQLTERD-ECAYQEMITHLPLC 123
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.780e-16 Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 346 AATDFPLKRPRDDGEKEANNNNNGSVLMEM---DSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 +ATD LKRPR++ ++N G+ ME D K+P C S+VIPGW ++PMWPGEAHSLK EK+LFQG+S Q+V VF S+ G+ G LT + CA+ +++ L C Sbjct: 7 SATD--LKRPREE------DDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSA-TYGKVLVLDGVIQLTERD-ECAYQEMITHLPLC 116
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.450e-15 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 349 ATDFPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 +TD PLKR R+D E N ++ + QP+ +SSVIPGW I+PMWPGEAHSLK EKILFQG+S Q+V VF S+ G+ G LT + CA+ +++ L C Sbjct: 10 STDSPLKRQRED---EVNGVSD-----TLSKEPQPNGLSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSA-TYGKVLILDGVIQLTERD-ECAYQEMITHLPLC 115
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.179e-15 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 400 NNNNNGSVLMEMDSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 NNNNNG ++K+ CISSV+PGW I+P+WPGEAHSLK EKILFQG+S Q+V VF S+ G+ G LT + CA+ +++ L C Sbjct: 7 NNNNNGCT-----NDKESPCISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQDVMVFQST-TYGKVLVLDGVIQLTERD-ECAYQEMITHLPLC 98
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14 Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 340 SAAATDFPLKRPRDDGEKEANNNNNGSVLMEMDS-NKQP--DCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 S + +K RDD EK +N + +V M+++ +K P + +SSVIPGW I+PMWPGEAHSLK EKILFQG+S Q V VF SS G+ G LT + CA+ +++ L C Sbjct: 5 STVELESSMKEHRDDDEK-SNGFSVSAVSMDVEGGDKDPSGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSEYQKVMVFQSS-TYGKVLVLDGVIQLTERD-ECAYQEMITHLPLC 123
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPDE_NICSY (Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.620e-14 Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 397 ANNNNNGSVLMEMDSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 AN+NNNG +N+ P ISSV+PGW I+P+WPGEAHSLK EKILFQG+S QNV VF SS G+ G LT + CA+ +++ L C Sbjct: 4 ANHNNNGC------TNESP-YISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSS-TYGKVLVLDGVIQLTERD-ECAYQEMIAHLPLC 94
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD1_DATST (Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.881e-14 Identity = 44/90 (48.89%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 427 MEMDSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 ME +NK+ ISS++PGW I+P+WPGEAHSLK EKILFQG+S QNV VF SS G+ G LT + CA+ +++ L C Sbjct: 1 MEEANNKESPYISSILPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSS-TYGKVLILDGVIQLTERD-ECAYQEMITHLPLC 88
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.344e-13 Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 451 PDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 PD +SSVIPGW I+PMWPGEAHSLK EKILFQG+S QNV VF SS G+ G LT + CA+ +++ L C Sbjct: 17 PDGVSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSS-TYGKVLVLDGVIQLTERD-ECAYQEMIAHLPLC 96
BLAST of EY744339 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.293e-13 Identity = 46/101 (45.54%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 394 EANNNNNGSVLMEMDSNKQPDCISSVIPGWVPGITPMWPGEAHSLKGEKILFQGESRLQNVWVFPSSDVRGRS*FSMGENSLTSQGARCAHNKILPRLFPC 696 E N +NG ++ K+ ISSV+PGW I+P+WPGEAHSLK EKILFQG+S QNV VF SS G+ G LT + CA+ +++ L C Sbjct: 2 EVTNQSNGC----SNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSS-TYGKVLVLDGVIQLTERD-ECAYQEMITHLPLC 96 The following BLAST results are available for this feature:
BLAST of EY744339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744339 ID=EY744339; Name=EY744339; organism=Citrus sinensis; type=EST; length=955bpback to top |