EY744328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.200e-33 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLIMTSNVGSSVIEKGGRRI LDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR+LTKLEVKEI D Sbjct: 748 KNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 825
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.863e-32 Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLIMTSNVGSSVIEKGGRRI LD DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFR+LTKLEVKEI D Sbjct: 748 KNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIAD 825
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.177e-32 Identity = 71/78 (91.03%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLIMTSNVGSSVIEKGGRRI LD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFR+LTKLEVKEI D Sbjct: 751 KNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIAD 828
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.335e-30 Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLIMTSNVGSSVIEKGGRRI LDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FR+LTKLEVKEI D Sbjct: 696 KNTLLIMTSNVGSSVIEKGGRRIGFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIAD 772
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.064e-23 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLIMTSN+GS VIEKGG + L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFR+LTK EV+EI + Sbjct: 654 KNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAE 731
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.064e-23 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLIMTSN+GS VIEKGG + L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFR+LTK EV+EI + Sbjct: 654 KNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAE 731
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.025e-22 Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEIPD 234 KNTLLI+TSNVGS VIEKGG + L D+ +S Y RIK+LV EELKQYFRPEFLNRLDE+IVFR+LTK EV EI + Sbjct: 651 KNTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAE 728
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-19 Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEI 228 KNTLLIMTSN+GS VIEK G + L+ + ++ Y+R+++LV EELKQYFRPEFLNR+DE+IVFR+LTK EV++I Sbjct: 684 KNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDI 759
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16 Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGR-RIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEI 228 KN L+IMTSNVGS I KG I LD DE+ +SY +K+LV EELK YFRPE LNR+DE+++FR+L K ++ EI Sbjct: 769 KNALIIMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEI 845
BLAST of EY744328 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.255e-12 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 1 Query: 1 KNTLLIMTSNVGSSVIEKGGRRIXPXLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRKLTKLEVKEI 228 +NT++IMTSNVG+S +++ + + LD +EKD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I Sbjct: 653 RNTVIIMTSNVGASELKRN-KYVGFALDNEEKD--YKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDI 725 The following BLAST results are available for this feature:
BLAST of EY744328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744328 ID=EY744328; Name=EY744328; organism=Citrus sinensis; type=EST; length=554bpback to top |