EY744322

Overview
NameEY744322
Unique NameEY744322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744322 vs. ExPASy Swiss-Prot
Match: Y5621_ARATH (PHD finger protein At5g26210 OS=Arabidopsis thaliana GN=At5g26210 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.067e-31
Identity = 75/125 (60.00%), Postives = 84/125 (67.20%), Query Frame = 3 
Query:   15 VQSFTI*C--EKENLSLFGLPNETWXXXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKKLFQMINDLPTIFEVVTGNA-KQPKDPYLLNPFSGSR 380
            VQ F   C  EKENL L+G PNE W                  GINFARDGM EKDWLSLVAVHSD+WLLAVAF+FGARFGF K +RK+LF M+NDLPTIFEVV G A KQ KD   ++  S +R
Sbjct:   34 VQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNR 158
The following BLAST results are available for this feature:
BLAST of EY744322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5621_ARATH1.067e-3160.00PHD finger protein At5g26210 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-D02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744322 ID=EY744322; Name=EY744322; organism=Citrus sinensis; type=EST; length=941bp
CAATGTTTATTGGAGTGCAAAGCTTCACCATATAGTGTGAAAAAGAGAAC
TTGAGCCTATTTGGGCTTCCTAATGAGACATGGGAAGTTAATCTGCCTGT
TGAGGAAGTGCCTCCCGAGCTCCCTGAGCCAGTGTTAGGTATAAACTTTG
CTAGAGATGGAATGCAGGAGAAGGACTGGTTATCACTGGTTGCAGTGCAC
AGTGATTCATGGTTGCTTGCTGTAGCTTTTTATTTTGGTGCACGCTTTGG
ATTTGGCAAAAATGAAAGGAAGAAACTTTTCCAGATGATAAATGATCTCC
CGACCATCTTTGAAGTTGTAACAGGAAATGCTAAGCAACCAAAGGACCCT
TATTTGTTGAATCCATTCTCCGGTTCCCGGATTCTGCGGAACTTTTCCGG
ACGTTGTGGGTCGTCATGGCGGTGGCTACAACGTAATTTGAAGTTGATCA
CGAAGATATAAATGGCTGTAGCACCGACGCGTTTCACGACAATCAAGGAA
ATCAAAGATTGTTTCTTCCATAAGTCCATTCTGTCGGGGAGTCCCTACTT
TCAGGATAATGACAATGTATCTGTAACCCTCTACAATGATAGATTCAAGG
TGGTTCAATATTTCAAGGGCCAGAACATTTATTGTTCCTGGTATGGCGAA
TGTTATTTGGGTATCCCCAAAATGGTGCTACGCATGGTTTATTGCATTAT
TCGCTAGGCCCCGGTACGGGGTGGGCCCATTCGAACCATGGGATTTTCAA
GAAATTTAAAGAAAGGATTCTCAGGGCCCCTCCGGTGAAACAAAAGGGGG
TTAGAATTTCCCACCCCCCTTTTTCCCACCACCCACGGGAATTGGAAAAA
ACCAAACCCGGTGGTATGGGGGGCTGTTGAACCCCCTATCTGTGGAAAAA
AAACCCAGGTGGCCAGGACAATTTGGCCGTCTCCCTTCTTC
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