EY744318

Overview
NameEY744318
Unique NameEY744318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length968
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.944e-58
Identity = 123/200 (61.50%), Postives = 136/200 (68.00%), Query Frame = 2
Query:   77 MASMVSTNCAQFSGLRRSSPT---------QSFSQHVNXXXXXXXXXXXXXXXX--VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNF 643
            MA+   T    FSGLRR SP          QSF   VN                  VVAMA S KFFVGGNWKCNGTK+SI KL+SDLN A LE          FVYIDQVK+SLTDRI+I+ QNSWVGKGGAFTGEISVEQLKD+GCKWV+LGHSER+HVIGE D FIGKKAAYALSEGLGVIA IG  + +++  K F
Sbjct:    1 MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTF 200          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.810e-56
Identity = 120/195 (61.54%), Postives = 138/195 (70.77%), Query Frame = 2
Query:   83 SMVSTNCAQFSGLRRS--------SPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNF 643
            S VST   QFSGLRRS        S   SF Q+V+                VVAMA S KFFVGGNWKCNGTKESITKLVSDLN A LE          FVYIDQVK+SLT R+EI+AQN W+GKGGAFTGEISVEQLKD+GC+WV+LGHSER+HVIGE + FIGKKAAYAL++G+GVIA IG  + +++  K F
Sbjct:   17 SAVST---QFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSRRCPRG-VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTF 207          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.488e-56
Identity = 113/178 (63.48%), Postives = 128/178 (71.91%), Query Frame = 2
Query:  110 FSGLRRSSPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNF 643
            +SGLRRS P    S                    VVAMA + KFFVGGNWKCNGTK+ I+KLVSDLN AKLE          F+Y+DQVK+SLTDRIEI+ QNSWV KGGAFTGEISVEQLKDIG KWV+LGHSER+HVIGEDD FIGKKAAYAL+EGLGVIA IG  + +++  K F
Sbjct:   22 YSGLRRSCPKLDQSHSSLFQHLSLSSSSRKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEKLEEREAGKTF 199          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.943e-53
Identity = 101/144 (70.14%), Postives = 118/144 (81.94%), Query Frame = 2
Query:  212 VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNF 643
            +VAMA S KFFVGGNWKCNGTKESI+KLVSDLN A LE          F+YIDQVK+SLTDRIE++AQN+W+GKGGAFTGEIS EQL DIGC+WV+LGHSER+HVIGEDD FIGKKAAYALS+ L V+A IG  + +++  K F
Sbjct:   40 LVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGELLEEREAGKTF 183          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.139e-34
Identity = 73/148 (49.32%), Postives = 99/148 (66.89%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKNRKNFLWPVFNQIKS 673
            KFFVGGNWKCNGT+ES++K+V  LN+  +             +V++      L   I++AAQN WV KGGAFTGE+S + L ++G  WV+LGHSER+ ++GE + F+GKKAAYA SEGLGVIA IG  + +++  K F    F Q+KS
Sbjct:    4 KFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTF-DVCFKQLKS 150          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.938e-32
Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKK 628
            KFFVGGNWKCNGT E + K+V+ LN+A++  E          +V++  VKN L     +AAQN WV KGGAFTGE+S E L ++G  WV+LGHSER+ ++ E + F+G K AYALS+GL VIA +G T+ +++
Sbjct:    4 KFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQRE 136          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 6.545e-32
Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKK 628
            KFFVGGNWKCNGT + + K+V  LN+ ++             +V++  VK+ L     +AAQN WV KGGAFTGE+S E L ++G  WV+LGHSER+ ++GE + F+G K AYALS+GL VIA +G T+ +++
Sbjct:    4 KFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQRE 136          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.548e-32
Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 2
Query:  221 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIG 607
            MA S KFFVGGNWK NG K+S+ +L+  LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSER+HV GE D  IG+K A+AL+EGLGVIA IG
Sbjct:    1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIG 129          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.548e-32
Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 2
Query:  236 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIGGTVAKKKN 631
            KFFVGGNWKCNGT E + K+++ LN  D   +          +V++  VKN L     +AAQN WV KGGAFTGE+S E L ++   WV+LGHSER+ ++GE + F+G K AYALS+GL VIA +G T+ ++++
Sbjct:    4 KFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERES 137          
BLAST of EY744318 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 8.548e-32
Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 2
Query:  221 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERKHVIGEDDPFIGKKAAYALSEGLGVIAWIG 607
            MA S KFFVGGNWK NG K+S+ +L+  LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSER+HV GE D  IG+K A+AL+EGLGVIA IG
Sbjct:    1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIG 129          
The following BLAST results are available for this feature:
BLAST of EY744318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
TPIC_ARATH6.944e-5861.50Triosephosphate isomerase, chloroplastic OS=Arabid... [more]
TPIC_SPIOL3.810e-5661.54Triosephosphate isomerase, chloroplastic OS=Spinac... [more]
TPIC_FRAAN8.488e-5663.48Triosephosphate isomerase, chloroplastic OS=Fragar... [more]
TPIC_SECCE3.943e-5370.14Triosephosphate isomerase, chloroplastic OS=Secale... [more]
TPIS_STELP3.139e-3449.32Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIS_COPJA2.938e-3250.38Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_MAIZE6.545e-3248.12Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_PONAB8.548e-3254.26Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PETHY8.548e-3248.51Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_PANTR8.548e-3254.26Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-C10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744318 ID=EY744318; Name=EY744318; organism=Citrus sinensis; type=EST; length=968bp
CAAAGGCTGAGCAAGAGCAAGAGCAAGAGCCAAAGCAGCTGAGATTATAA
TTTGACTTTCACTTTGACTTTTCACAATGGCGTCAATGGTCTCCACAAAC
TGCGCTCAATTCTCCGGCCTGCGCCGCTCATCGCCCACACAGTCTTTTTC
ACAGCACGTCAACTCTCACCTCCGCCTCTTCTCTTCTCGTAGACCTCGCC
GCGGCAGCAGCGTTGTCGCCATGGCCAGCTCCAACAAGTTCTTTGTTGGG
GGAAACTGGAAGTGTAATGGAACAAAGGAATCTATCACCAAGCTTGTTTC
GGACCTGAACGATGCAAAGTTGGAGGCAGATGTTGATGTTGTGGTAGCGC
CTCCCTTTGTTTACATTGATCAAGTGAAGAATTCATTAACAGATAGAATT
GAGATAGCAGCTCAGAACTCTTGGGTCGGAAAAGGTGGAGCATTTACAGG
AGAAATCAGTGTGGAACAACTGAAAGATATTGGCTGCAAGTGGGTTGTTC
TGGGGCATTCTGAGCGCAAACATGTTATTGGGGAAGATGATCCGTTTATA
GGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGACTTGGTGTAATAGCTTG
GATCGGGGGAACAGTTGCAAAAAAAAAAAACAGGAAAAACTTTTTATGGC
CTGTTTTCAACCAAATTAAAAGCTAATGCAAAGGCTATACCCCAAGTGGG
AAAAAGGAACACCTTGCCAAAAAAACCCTGAATGGGCAATTCGAAACTGG
AAAAAGGGGGCCCACCCCCAAGACAGGGCCAAGAAAAGAAATGCGTGCTC
CTTTCGAGAATAGGGCTAAAAAAAAGGGGTCTCACACAAAAAATTGGCAT
ACAAAAAAACAAACAATATGCAAGGAGAGGAGGCGATAAGAATGGGAAAA
CACAATTGGCGGCGAAAAATACTTCAAAAACAAAAACAAAGAAATAATAA
GGGAAGGGGTTTTCTCCC
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