EY744314

Overview
NameEY744314
Unique NameEY744314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1051
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12877 contig Csv1_Contig12877:1..1051. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY744314 vs. ExPASy Swiss-Prot
Match: MEPCE_HUMAN (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.027e-25
Identity = 80/235 (34.04%), Postives = 120/235 (51.06%), Query Frame = 3
Query:   27 AQQLKKRKGKDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIV--------RTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLF-DIVSFKQENFVHGRD------SPEKYYDAILCLNVTQWIHLNWGDDGVDYFIYEDMETFFRPGWAFLGWNPHPWGSS*KKIAL 686
            A   KK++ K  F +GNY  YYGYR      ED R +VLK EWF G+D LD+GCN G +T+ IA K+    ++G+DIDS  +  A  ++R  +        +T   +           + K      ++TA++    A       A+ ++F + V F   N+V  RD      +PE  YD +LCL++T+W+HLNWGD+G+   ++  +    RPG   L   P PW S  K+  L
Sbjct:  403 AAGFKKQQRK--FQYGNYCKYYGYR--NPSCEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPE--YDVVLCLSLTKWVHLNWGDEGLKR-MFRRIYRHLRPG-GILVLEPQPWSSYGKRKTL 629          
BLAST of EY744314 vs. ExPASy Swiss-Prot
Match: MEPCE_MOUSE (7SK snRNA methylphosphate capping enzyme OS=Mus musculus GN=Mepce PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.903e-25
Identity = 84/247 (34.01%), Postives = 123/247 (49.80%), Query Frame = 3
Query:   30 QQLKKRKGKDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCS------------PAERNLF-DIVSFKQENFVHGR----DSPEKYYDAILCLNVTQWIHLNWGDDGVDYFIYEDMETFFRPGWAFLGWNPHPWGSS*KKIALGSENPLLQYFQ 719
            QQLK       F +GNY  YYGYR      ED R +VLK EWF+G+D LD+GCN G +T+ IA K+    ++G+DID   +  A    R+ +R   +E+ R  A   E     +G E  +T  +      S   S             A+ ++F + V F   N+V  R    D+    YD +LC ++T+W+HLNWGD+G+   ++  +    RPG   L   P PW S  K+ +L +E     YF+
Sbjct:  386 QQLK-------FQYGNYCKYYGYR--NPSCEDVRLRVLKPEWFQGRDVLDLGCNVGHLTLSIACKWGPARMVGLDIDPRLIHSA----RQNIRHYLSEELRLQAQTSEGDPGTEGEEGTITVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDELVDAQRPEYDVVLCFSLTKWVHLNWGDEGLKR-MFRRIYRHLRPG-GILVLEPQPWSSYCKRKSL-TETIYKNYFR 616          
BLAST of EY744314 vs. ExPASy Swiss-Prot
Match: BIN3D_CAEEL (Probable methyltransferase Y17G7B.18 OS=Caenorhabditis elegans GN=Y17G7B.18 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.695e-25
Identity = 77/223 (34.53%), Postives = 110/223 (49.33%), Query Frame = 3
Query:   12 EEKGEAQQLKKRKG--KDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP----EKYYDAILCLNVTQWIHLNWGDDGVDYFIYEDMETFFRPGWAFLGWNPHPWG 662
            EEK  A+  K++       + +GN+  YYG R+  G   D R  V +K+WFE K  LDIGCN+G +T+ IA+ F+ R I+GIDID + +  A  ++R     E     +  AS         G++    + + E         P      D + FK+EN+V   D      +  +D IL L++T+WIHLNWGDDG        M  FFR  +A L    HP G
Sbjct:   98 EEKSAAENRKQKTEYFNKKYRYGNFDRYYGIRLNPG-ESDKRLSVFQKDWFEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRHYCDHETEVSGKFPAS--------FGVQFGTVSQRNEAPRSFSTKFP------DNIWFKKENYVLESDEMLDMIQPEFDVILALSITKWIHLNWGDDG--------MRRFFRRAYAQL----HPGG 293          
BLAST of EY744314 vs. ExPASy Swiss-Prot
Match: BN3D2_DROME (Probable methyltransferase CG1239 OS=Drosophila melanogaster GN=CG1239 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.487e-16
Identity = 71/219 (32.42%), Postives = 100/219 (45.66%), Query Frame = 3
Query:    3 TRPEEKGEAQQL----KKRKGKDV-FPFGNYKNYYGYRIGQGLNEDPRFKVL--KKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD----SPEKYYDAILCLNVTQWIHLNWGDDGVDYFIYEDMETFFRPG 626
            +RP  +   ++L    K  + KD+ F +GNYK+YYG RI      D R  VL  + + F  K  LDIGCNSG ++IQIA+KF  +S++G+DID   + DA        +T  + KR A          G G+                            + F   N+V   D         +D ILCL+VT+WIHLN+ D G+    +  M    RPG
Sbjct:   50 SRPPAQSPKKRLHLNGKPMQNKDLNFKYGNYKHYYGKRILNKDFHDIRLDVLGTQPDLFRNKQLLDIGCNSGHLSIQIARKFEVKSLVGLDIDRGLINDAQ-------KTVSHLKRHAT--------PGQGIPH--------------------------IQFVHGNYVLEDDVLLEIERPQFDVILCLSVTKWIHLNFCDSGLKQ-AFRRMYLQLRPG 226          
The following BLAST results are available for this feature:
BLAST of EY744314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
MEPCE_HUMAN1.027e-2534.047SK snRNA methylphosphate capping enzyme OS=Homo s... [more]
MEPCE_MOUSE3.903e-2534.017SK snRNA methylphosphate capping enzyme OS=Mus mu... [more]
BIN3D_CAEEL8.695e-2534.53Probable methyltransferase Y17G7B.18 OS=Caenorhabd... [more]
BN3D2_DROME1.487e-1632.42Probable methyltransferase CG1239 OS=Drosophila me... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-C06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744314 ID=EY744314; Name=EY744314; organism=Citrus sinensis; type=EST; length=1051bp
CCACGCGTCCGGAAGAAAAGGGCGAAGCTCAACAACTTAAGAAAAGAAAG
GGCAAAGACGTTTTTCCCTTCGGCAATTACAAAAACTACTACGGTTATCG
CATTGGTCAGGGCTTGAACGAAGATCCTCGATTTAAAGTGTTGAAAAAGG
AATGGTTTGAAGGCAAAGATTGTCTCGATATTGGCTGCAATAGTGGCATC
ATTACCATTCAAATTGCACAAAAGTTTAACTGCCGGAGTATCCTTGGGAT
TGACATCGACTCTAATCGTGTTGCGGATGCATATTGGCACCTTAGGAAAA
TTGTAAGAACGGAACATAATGAGAAAAGACGAGCGAATGCTTCTAGAGTG
GAGGTTATAGAGAAAGGAGATGGTTTAGAGAAGAACGTAACTGCTGCACA
AGAAGAGAAGAAGGCAATTTCAAGGAATTGTTCTCCTGCAGAAAGAAATC
TCTTTGACATAGTTTCTTTCAAACAGGAAAATTTTGTACATGGTCGGGAC
TCACCGGAGAAGTACTATGATGCGATTCTCTGTTTGAACGTAACACAATG
GATACATTTGAATTGGGGGGATGATGGGGTTGATTACTTTATTTATGAGG
ATATGGAAACCTTCTTCCGTCCGGGGTGGGCATTTTTGGGTTGGAACCCT
CACCCTTGGGGATCCTCATGAAAAAAAATCGCCCTGGGGTCAGAGAACCC
CCTACTACAATATTTTCAACATATCGAGGGTATTTTCCACAAACAAGCTT
CCGGAACAATTCTCCACCAATCAAATTGGGAATCACAACCTTGCGATAAG
GAAACCCTGCCGCGGCGGGGCTCCTAACGCCCAACCCAATCGCGGGTCGC
ACACAGAACACGCTAATTTTCTCATTACCGCAGAACTTGACCCTCATCTC
AAGCTAAACCATCGTCTAGGCTTTGGCTACGGGGCCGCCGCGCGTTGTAA
AGCAAATCACCAACTCATCGCATTTGTCATTGTTATCTCAGGAAGGGTAC
CGCAGTGATTAAGCTCCGTGGCGTGTGCTTGCCATTTGTGGTCCGGCTTT
C
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