EY744312

Overview
NameEY744312
Unique NameEY744312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1016
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744312 vs. ExPASy Swiss-Prot
Match: FB132_ARATH (F-box protein At2g41170 OS=Arabidopsis thaliana GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.479e-23
Identity = 56/97 (57.73%), Postives = 67/97 (69.07%), Query Frame = 2 
Query:   83 LVSWFQKGGLV--IRPLKQKMSFGSKPANTEKE-KISLLDLPDLTLECILEKLSPAGLCNMAGVCSSLRDRCTSDHLWEKHMKQKWGRVIGDVAKTE 364
            +VSW  +  +   IR L  +     K  N E E K+SLLDLPDLTL+CILEKLSP+ LC M  VCS LRD+C SDHLWEKHM+ KWGR++GD A  E
Sbjct:   22 IVSWLARSIIRNGIRTLTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQE 118
[Close]
BLAST of EY744312 vs. ExPASy Swiss-Prot
Match: FB121_ARATH (F-box protein At2g32560 OS=Arabidopsis thaliana GN=At2g32560 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.757e-20
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 2 
Query:  155 PANTEKEKISLLDLPDLTLECILEKLSPAGLCNMAGVCSSLRDRCTSDHLWEKHMKQKWGRVIGDVAKTE 364
            PA+   +++S+LDLP+L L+CIL+ L P+GLC+MA VCSSLR+RC SDHLWEKH+K KWG+++G  A  E
Sbjct:   52 PASPVIDQMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRERCVSDHLWEKHLKTKWGKILGPAAHRE 121
[Close]
BLAST of EY744312 vs. ExPASy Swiss-Prot
Match: FB118_ARATH (F-box protein At2g26850 OS=Arabidopsis thaliana GN=At2g26850 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.334e-19
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  176 KISLLDLPDLTLECILEKLSPAGLCNMAGVCSSLRDRCTSDHLWEKHMKQKWGRVIGDVAKTE 364
            K+S+LDLPDL L+CILE L P+ LC MA VCSSLR+RC SDHLWEKH+K KWG+++G  A  E
Sbjct:   59 KMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWEKHLKTKWGKILGPSAHKE 121
The following BLAST results are available for this feature:
BLAST of EY744312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FB132_ARATH3.479e-2357.73F-box protein At2g41170 OS=Arabidopsis thaliana GN... [more]
FB121_ARATH2.757e-2060.00F-box protein At2g32560 OS=Arabidopsis thaliana GN... [more]
FB118_ARATH2.334e-1966.67F-box protein At2g26850 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-C04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744312 ID=EY744312; Name=EY744312; organism=Citrus sinensis; type=EST; length=1016bp
CTATCAAGTCTTTGGCCCACCATTGATGAAGAGTGATTGGAGATTGTTGT
CTCCATGGTTTTGGAGGGAATTATCAAGCTTTTTGGTTTCGTGGTTTCAA
AAAGGTGGCCTTGTCATTAGGCCATTGAAGCAGAAGATGAGTTTTGGATC
AAAACCTGCAAATACGGAGAAAGAGAAAATTTCCCTCTTGGATTTGCCTG
ATTTAACCTTGGAATGCATTCTTGAGAAGCTTTCACCAGCTGGTTTGTGT
AACATGGCTGGAGTTTGCAGTTCTCTTCGAGATAGATGTACAAGTGATCA
TTTGTGGGAGAAACACATGAAACAGAAATGGGGGAGAGTTATTGGTGATG
TTGCCAAAACAGAAATGGCAATGGCACTTGGTCTCCGGACAAAGATCAAG
CCTTATGAATAACAAGAAGCAGACAGGGATTTTTCTGGTCCTCTCTATAC
CTGATGGACATTTTATTGGAATTGAACCAATACACACAAAACTAAACATA
ATACCAAAAAGTACATAACCATAAACAAACCACACAACACAAACACGAAT
CTCATAAAGAGGACAAATAAACGCACCACACGATCCGAACATGATATCCA
ACAAAGCACAGCCCAACGATAACATCTGCTTGTGAACACCACCACCAAAA
CACACAGATTAATCGCGACATCAACTAGCGAAAAAAAGTCGCCTCGGCAA
CCCGATAGACACCAATCCACACACCCCTAGACAACGGTGCGACGAAAATA
AAGACCAACCCACAGAAACCTACTACCACAACACCCTATCACAACTCCCG
AAACTATACCCAACATCAATCTCAGCTACAATCGCACCAAGCACCCAACA
GAAATAACTGCTACACACCCCAAAATTTCACACCAACACAAGCCCTGCAA
TCACACCACGCACAAACGGCATACTACCAAACGATAAGCACGTATACCGC
ACCAATCCACACCACCGAGACAAAACACGCACACCACGCCCACACAAACT
GCACCACCAACACACG
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