EY744303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_ORYSJ (Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.028e-64 Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 EQLL+ V V VD K LRSLPYDSPGQTFVAFEK EGV A GKFSN+L+FIVKEVDP+T YQLEDLE+ +ADY++KVGVSNFRNAWES+ P+ ERVDEYGLG RESLAEAVSAVI +LGMQPCEGT+VV +NSRSH Sbjct: 682 EQLLEEVVVFVDASEADEFSEVATKSLRSLPYDSPGQTFVAFEKLEGVLATGKFSNILKFIVKEVDPSTGEADDDGVEDEYQLEDLEITSADYMLKVGVSNFRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSH 837 HSP 2 Score: 59.6918 bits (143), Expect = 1.028e-64 Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 481 LSGVFLGNVKVLVRLLFGIDGPKEVAMKLAVKSEE 585 LSGVF+GNVKVLVRL FG+ GPKEVAMKLAV+S++ Sbjct: 841 LSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDD 875
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG1_ORYSJ (Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica GN=Os03g0227000 PE=2 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 8.590e-64 Identity = 106/156 (67.95%), Postives = 121/156 (77.56%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 EQLL+ VTV VD KPLRSLPYDSPGQ FVAFEKPE VPA GKFSN+L+FIVKEVD +T YQ+EDLE+V+ADY+++V VSNFRNAWE++ P+ ERVDEYGLG RESLAEAVSAVIS+LGMQPCEGTEVV N+RSH Sbjct: 677 EQLLENVTVYVDATDAEEFSEVCSKPLRSLPYDSPGQIFVAFEKPEHVPATGKFSNVLKFIVKEVDTSTGEVDEDGVEDEYQIEDLEIVSADYMLRVAVSNFRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSH 832 HSP 2 Score: 56.225 bits (134), Expect = 8.590e-64 Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 1 Query: 481 LSGVFLGNVKVLVRLLFGIDGPKEVAMKLAVKSEE 585 LSGVF+G+ KVLVRL FG+ GPKEVAMKLAV+S++ Sbjct: 836 LSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDD 870
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_ARATH (Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 2.916e-58 Identity = 102/156 (65.38%), Postives = 112/156 (71.79%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 EQLL+ V VIVD K L SLPYDSPGQ FV FEKP GVPAVGKFSN L F+VKEVDP+T YQLEDLEVVA DY++KVGVSNFRNAWES+ + ERVDEYGLG RESL EAV AV+ LLGMQ CEGTE + N+RSH Sbjct: 679 EQLLERVNVIVDASEAEEFSEVTSKALNSLPYDSPGQAFVVFEKPAGVPAVGKFSNTLTFVVKEVDPSTGEAEDDGVEDEYQLEDLEVVAGDYMVKVGVSNFRNAWESMDEEDERVDEYGLGQRESLGEAVKAVMDLLGMQTCEGTETIPLNARSH 834 HSP 2 Score: 50.0618 bits (118), Expect = 2.916e-58 Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 481 LSGVFLGNVKVLVRLLFGIDGPKEVAMKLAVKSEE 585 LSGV++GNVKVLVR FG+D K++AMKL V++E+ Sbjct: 838 LSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAED 872
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_BOVIN (Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 7.394e-23 Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPE--GVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 +QLL+ VTV V+ P SLPY+ PG + PE + A G FS ++F V++ DP T Y LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH Sbjct: 668 DQLLEKVTVQVEPSEAYEVLCCVPAP--SLPYNQPGVCYTLVRLPEDDSIAAAGTFSCTMKFTVRDCDPDTGVPTEEGYDDEYVLEDLEVTVSDHIQKVMKPNFAAAWEEVGNTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSH 823
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_HUMAN (Coatomer subunit gamma OS=Homo sapiens GN=COPG PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.670e-22 Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 78 PLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 P RSLPY+ PG T VA K + FS M++F VK+ DPTT Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE ++ V +N +H Sbjct: 694 PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTH 826
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_HUMAN (Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.260e-22 Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 +QLL+ VTV ++ P SLPY+ PG + P+ P G FS ++F V++ DP T Y LEDLEV +D++ KV NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH Sbjct: 668 DQLLEKVTVQMEPSDSYEVLSCIPAP--SLPYNQPGICYTLVRLPDDDPTAVAGSFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSH 823
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_MOUSE (Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.821e-21 Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 +QLL+ VTV ++ P SLPY+ PG + P+ P G FS ++F V++ DP T Y LEDLEV +D++ K+ NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH Sbjct: 668 DQLLEKVTVQMEPSDSYEVLCCIPAP--SLPYNQPGICYTLVRLPDEDPTAVAGTFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKILKPNFAAAWEEVGDAFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSH 823
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_RAT (Coatomer subunit gamma OS=Rattus norvegicus GN=Copg PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.107e-21 Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 78 PLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 P+RSLPY+ PG T VA K + FS +++F VK+ DP T Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE ++ V N +H Sbjct: 694 PVRSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPENKNTH 826
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_BOVIN (Coatomer subunit gamma OS=Bos taurus GN=COPG PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 3.107e-21 Identity = 52/133 (39.10%), Postives = 75/133 (56.39%), Query Frame = 3 Query: 78 PLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 P RSLPY+ PG T VA K + FS +++F VK+ DPTT Y LEDLEV AD++ KV NF AW+ +G +F++ + + L ++L EAV ++ LGM PCE ++ V +N +H Sbjct: 694 PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEADDEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTH 826
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_XENTR (Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.921e-21 Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470 +QLL+ VTV ++ P SLPY+ PG ++ P+ P FS ++F+V++ DP T Y LEDLEV +D++ K+ NF AWE IG +E+ + + L +SL EAV+ +I LGMQPCE ++ V N SH Sbjct: 669 DQLLEKVTVQMEPSEAYEVVHYVPAP--SLPYNQPGISYTLVRLPDDDPTAVSCTFSCTMKFVVRDCDPQTGVPDDEGYSDEYVLEDLEVTLSDHIQKILKPNFGAAWEEIGDTYEKEETFALTTTKSLEEAVNNIIKFLGMQPCERSDKVPENKNSH 824 The following BLAST results are available for this feature:
BLAST of EY744303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY744303 ID=EY744303; Name=EY744303; organism=Citrus sinensis; type=EST; length=982bpback to top |