EY744303

Overview
NameEY744303
Unique NameEY744303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_ORYSJ (Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.028e-64
Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            EQLL+ V V VD            K LRSLPYDSPGQTFVAFEK EGV A GKFSN+L+FIVKEVDP+T           YQLEDLE+ +ADY++KVGVSNFRNAWES+ P+ ERVDEYGLG RESLAEAVSAVI +LGMQPCEGT+VV +NSRSH
Sbjct:  682 EQLLEEVVVFVDASEADEFSEVATKSLRSLPYDSPGQTFVAFEKLEGVLATGKFSNILKFIVKEVDPSTGEADDDGVEDEYQLEDLEITSADYMLKVGVSNFRNAWESMDPESERVDEYGLGARESLAEAVSAVIGILGMQPCEGTDVVPSNSRSH 837          

HSP 2 Score: 59.6918 bits (143), Expect = 1.028e-64
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 1
Query:  481 LSGVFLGNVKVLVRLLFGIDGPKEVAMKLAVKSEE 585
            LSGVF+GNVKVLVRL FG+ GPKEVAMKLAV+S++
Sbjct:  841 LSGVFIGNVKVLVRLSFGLSGPKEVAMKLAVRSDD 875          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG1_ORYSJ (Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica GN=Os03g0227000 PE=2 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 8.590e-64
Identity = 106/156 (67.95%), Postives = 121/156 (77.56%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            EQLL+ VTV VD            KPLRSLPYDSPGQ FVAFEKPE VPA GKFSN+L+FIVKEVD +T           YQ+EDLE+V+ADY+++V VSNFRNAWE++ P+ ERVDEYGLG RESLAEAVSAVIS+LGMQPCEGTEVV  N+RSH
Sbjct:  677 EQLLENVTVYVDATDAEEFSEVCSKPLRSLPYDSPGQIFVAFEKPEHVPATGKFSNVLKFIVKEVDTSTGEVDEDGVEDEYQIEDLEIVSADYMLRVAVSNFRNAWENMDPESERVDEYGLGVRESLAEAVSAVISILGMQPCEGTEVVPKNARSH 832          

HSP 2 Score: 56.225 bits (134), Expect = 8.590e-64
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 1
Query:  481 LSGVFLGNVKVLVRLLFGIDGPKEVAMKLAVKSEE 585
            LSGVF+G+ KVLVRL FG+ GPKEVAMKLAV+S++
Sbjct:  836 LSGVFIGDAKVLVRLSFGLSGPKEVAMKLAVRSDD 870          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_ARATH (Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 2.916e-58
Identity = 102/156 (65.38%), Postives = 112/156 (71.79%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            EQLL+ V VIVD            K L SLPYDSPGQ FV FEKP GVPAVGKFSN L F+VKEVDP+T           YQLEDLEVVA DY++KVGVSNFRNAWES+  + ERVDEYGLG RESL EAV AV+ LLGMQ CEGTE +  N+RSH
Sbjct:  679 EQLLERVNVIVDASEAEEFSEVTSKALNSLPYDSPGQAFVVFEKPAGVPAVGKFSNTLTFVVKEVDPSTGEAEDDGVEDEYQLEDLEVVAGDYMVKVGVSNFRNAWESMDEEDERVDEYGLGQRESLGEAVKAVMDLLGMQTCEGTETIPLNARSH 834          

HSP 2 Score: 50.0618 bits (118), Expect = 2.916e-58
Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 1
Query:  481 LSGVFLGNVKVLVRLLFGIDGPKEVAMKLAVKSEE 585
            LSGV++GNVKVLVR  FG+D  K++AMKL V++E+
Sbjct:  838 LSGVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAED 872          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_BOVIN (Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.394e-23
Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPE--GVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            +QLL+ VTV V+             P  SLPY+ PG  +     PE   + A G FS  ++F V++ DP T           Y LEDLEV  +D++ KV   NF  AWE +G  FE+ + + L   ++L EAV+ +I+ LGMQPCE ++ V  N  SH
Sbjct:  668 DQLLEKVTVQVEPSEAYEVLCCVPAP--SLPYNQPGVCYTLVRLPEDDSIAAAGTFSCTMKFTVRDCDPDTGVPTEEGYDDEYVLEDLEVTVSDHIQKVMKPNFAAAWEEVGNTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSH 823          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_HUMAN (Coatomer subunit gamma OS=Homo sapiens GN=COPG PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.670e-22
Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = 3
Query:   78 PLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            P RSLPY+ PG   T VA  K +       FS M++F VK+ DPTT           Y LEDLEV  AD++ KV   NF  AW+ +G +FE+ + + L   ++L EAV  ++  LGM PCE ++ V +N  +H
Sbjct:  694 PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTVADHIQKVMKLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTH 826          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_HUMAN (Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.260e-22
Identity = 58/158 (36.71%), Postives = 83/158 (52.53%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            +QLL+ VTV ++             P  SLPY+ PG  +     P+  P    G FS  ++F V++ DP T           Y LEDLEV  +D++ KV   NF  AWE +G  FE+ + + L   ++L EAV+ +I+ LGMQPCE ++ V  N  SH
Sbjct:  668 DQLLEKVTVQMEPSDSYEVLSCIPAP--SLPYNQPGICYTLVRLPDDDPTAVAGSFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEVGDTFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSH 823          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_MOUSE (Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.821e-21
Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            +QLL+ VTV ++             P  SLPY+ PG  +     P+  P    G FS  ++F V++ DP T           Y LEDLEV  +D++ K+   NF  AWE +G  FE+ + + L   ++L EAV+ +I+ LGMQPCE ++ V  N  SH
Sbjct:  668 DQLLEKVTVQMEPSDSYEVLCCIPAP--SLPYNQPGICYTLVRLPDEDPTAVAGTFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKILKPNFAAAWEEVGDAFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSH 823          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_RAT (Coatomer subunit gamma OS=Rattus norvegicus GN=Copg PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.107e-21
Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 3
Query:   78 PLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            P+RSLPY+ PG   T VA  K +       FS +++F VK+ DP T           Y LEDLEV  AD++ KV   NF  AW+ +G +FE+ + + L   ++L EAV  ++  LGM PCE ++ V  N  +H
Sbjct:  694 PVRSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPENKNTH 826          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG_BOVIN (Coatomer subunit gamma OS=Bos taurus GN=COPG PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.107e-21
Identity = 52/133 (39.10%), Postives = 75/133 (56.39%), Query Frame = 3
Query:   78 PLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            P RSLPY+ PG   T VA  K +       FS +++F VK+ DPTT           Y LEDLEV  AD++ KV   NF  AW+ +G +F++ + + L   ++L EAV  ++  LGM PCE ++ V +N  +H
Sbjct:  694 PARSLPYNQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEADDEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTH 826          
BLAST of EY744303 vs. ExPASy Swiss-Prot
Match: COPG2_XENTR (Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.921e-21
Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 3
Query:    3 EQLLDPVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSH 470
            +QLL+ VTV ++             P  SLPY+ PG ++     P+  P      FS  ++F+V++ DP T           Y LEDLEV  +D++ K+   NF  AWE IG  +E+ + + L   +SL EAV+ +I  LGMQPCE ++ V  N  SH
Sbjct:  669 DQLLEKVTVQMEPSEAYEVVHYVPAP--SLPYNQPGISYTLVRLPDDDPTAVSCTFSCTMKFVVRDCDPQTGVPDDEGYSDEYVLEDLEVTLSDHIQKILKPNFGAAWEEIGDTYEKEETFALTTTKSLEEAVNNIIKFLGMQPCERSDKVPENKNSH 824          
The following BLAST results are available for this feature:
BLAST of EY744303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
COPG2_ORYSJ1.028e-6468.59Coatomer subunit gamma-2 OS=Oryza sativa subsp. ja... [more]
COPG1_ORYSJ8.590e-6467.95Coatomer subunit gamma-1 OS=Oryza sativa subsp. ja... [more]
COPG_ARATH2.916e-5865.38Coatomer subunit gamma OS=Arabidopsis thaliana GN=... [more]
COPG2_BOVIN7.394e-2337.97Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE... [more]
COPG_HUMAN3.670e-2240.60Coatomer subunit gamma OS=Homo sapiens GN=COPG PE=... [more]
COPG2_HUMAN6.260e-2236.71Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 ... [more]
COPG2_MOUSE1.821e-2136.08Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 ... [more]
COPG_RAT3.107e-2139.10Coatomer subunit gamma OS=Rattus norvegicus GN=Cop... [more]
COPG_BOVIN3.107e-2139.10Coatomer subunit gamma OS=Bos taurus GN=COPG PE=1 ... [more]
COPG2_XENTR6.921e-2136.08Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-B07-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744303 ID=EY744303; Name=EY744303; organism=Citrus sinensis; type=EST; length=982bp
CAGAGCAACTACTGGACCCTGTCACTGTTATTGTGGATGCTTCTGAAGCT
GAGGAATTTGCTGAACTAGCGTCAAAACCTCTGAGATCTCTTCCTTATGA
TTCACCCGGACAGACCTTTGTGGCATTTGAAAAACCAGAAGGAGTCCCAG
CTGTTGGAAAATTTTCTAACATGTTGAGATTCATTGTTAAAGAGGTTGAT
CCAACAACTGGTGACGTAGAGGATGATGGTGTTGAAGATGAATATCAGTT
AGAGGACCTTGAGGTTGTTGCAGCTGATTACGTGATGAAAGTAGGGGTCT
CCAATTTCAGGAATGCATGGGAAAGCATAGGCCCAGACTTTGAGCGTGTA
GATGAATATGGCCTTGGCCCAAGGGAAAGTCTGGCTGAAGCTGTTAGTGC
TGTCATCAGCCTTCTTGGCATGCAGCCTTGTGAGGGCACGGAAGTTGTTG
CAAACAATTCAAGGTCACATANNTCCCGNNCTGTCTGGTGTTTTCCTTGG
CAACGTCAAGGTCCTAGTGCGTTTGCTGTTTGGAATTGATGGCCCAAAGG
AGGTTGCAATGAAACTGGCCGTTAAATCCGAGGAAGAATATGGACGCGGA
CTGATTCCCGAGAATTGTAGCTAGGCGGCGGGAACTTGACGCCATCCCTC
CTTTTTTCCCTTTAACTGGACACCCAGACCTTCTTTACCTCTTAATCGAC
GAAAATAACCGGAATGGCGGCCGACAAACAAGAACCCTTTGGAAAAGACC
CTTTGGATTCACGAACAACGGAGCGGAAGGGGTGCCTTGCGGGGAACAAT
TAAGGGCCCGTCGCACGCACCCTACAAATGGTGTCTTGTGTTATACGCCC
CACAATCAACGAGCCGATCATACCGAGAAGGCAATATTTCTTTTTTCGTG
AGGAGACAAACCCGCGAACGCGACCCCATTAATGAAACCGCGAAACAGTA
AGACAGCAAACGGGTGAGGAGCAATCTGAGGC
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