EY744296

Overview
NameEY744296
Unique NameEY744296
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.991e-73
Identity = 135/205 (65.85%), Postives = 163/205 (79.51%), Query Frame = 1
Query:    1 ENYKNVPRHLYGLTPSQMDMFMTEENPVCRQAASVTEETISSAHHYLNNGGMWSLSGMSDRGPSKYSMSVSMYRGGGGV--YDMXXXXXXXXXXXXXXXRIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYL 609
            +N+KNVP++ YGL  +QMDMFMTE++PV RQA  VTEE+ISS ++YLNNGG+WS+SGM+     +YSMSV MYRGGGG    +                RI YLGMPIV AVTELL+AQFMWLD+DN +KPIYLYINS GTQNEK E+VG+ET+AYAIAD ++YCKS VYT+NCGMA+GQAAMLLS+G KGYR +QP+SSTKLYL
Sbjct:   81 QNFKNVPQYFYGLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADARRYSMSVQMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYL 285          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.090e-22
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSS 594
            RIVYLGM +V +VTEL++A+F++L +++  KPIYLYINS+GT  +  E +G +T+A+AI D M Y K  ++T+  G A+G+AA+LL+ GAKG R   P+S+
Sbjct:  114 RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSST 213          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.037e-21
Identity = 49/104 (47.12%), Postives = 75/104 (72.12%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL 603
            RIVY+GMP+V AVTEL++A+ M+L + +  +PIY+YINS+GT  +  E+VG E++ +AI D++   K++V+TV  G A GQA +LLS G KG R + P++   +
Sbjct:  130 RIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMI 233          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.354e-21
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 1
Query:  292 RIVYLGMPIVSA----------VTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL 603
            RIVYLGMP+ S+          VT+L+IAQ ++L FD+  KPIY YINS+GT     ++VG ET+A+AI D + Y K  V+T+  G A G AAM+LS G KGYR   P+++  L
Sbjct:   31 RIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVL 144          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.941e-21
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 1
Query:  292 RIVYLGMPIVSA----------VTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKL 603
            RI+YLGMP+ S+          VTEL+IAQ ++L+FDN  KPIY YINS+GT     +++G ET+A+AI D M Y K  V+T+  G A G AAM+LS G  G R   P+++  L
Sbjct:   33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVL 146          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP2_GLOVI (ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter violaceus GN=clpP2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.451e-15
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RIVYLG PI   V ELLIAQ ++L+ ++ +KPI +YINS G         G ET A+A+ D M + +  + T+  G+A G +A+L++ G KG R   PNS   LY
Sbjct:   37 RIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGV-------AGFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILY 134          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEGEVAPLLD 648
            RIV+LG PI   V  L+IAQ ++L+ ++  K +YLYINS G         G+ T   AI D M Y K  V T+  G A   AA+LL+ GAKG R   PN+  ++ +  P  G   P  D
Sbjct:   37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNA--RIMIHQPLGGAEGPAKD 144          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEGEVAPLLD 648
            RIV+LG PI   V  L+IAQ ++L+ ++  K +YLYINS G         G+ T   AI D M Y K  V T+  G A   AA+LL+ GAKG R   PN+  ++ +  P  G   P  D
Sbjct:   37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNA--RIMIHQPLGGAEGPAKD 144          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLYLACPWEGEVAPLLD 648
            RIV+LG PI   V  L+IAQ ++L+ ++  K +YLYINS G         G+ T   AI D M Y K  V T+  G A   AA+LL+ GAKG R   PN+  ++ +  P  G   P  D
Sbjct:   37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNA--RIMIHQPLGGAEGPAKD 144          
BLAST of EY744296 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.950e-13
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  292 RIVYLGMPIVSAVTELLIAQFMWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQAAMLLSVGAKGYRGLQPNSSTKLY 606
            RI++LG  +   +   ++AQ ++LD +++SKPIYLYINS G         G+ T   AI D M Y KS V T+  G+A    A LL  G+KG R   P+S   ++
Sbjct:   31 RIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIH 126          
The following BLAST results are available for this feature:
BLAST of EY744296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CLPR1_ARATH1.991e-7365.85ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR4_ARATH2.090e-2250.50ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR3_ARATH1.037e-2147.12ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPR_SYNY31.354e-2148.25Putative ATP-dependent Clp protease proteolytic su... [more]
CLPR_SYNE73.941e-2147.37Putative ATP-dependent Clp protease proteolytic su... [more]
CLPP2_GLOVI1.451e-1543.81ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_THESQ3.950e-1340.34ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THEP13.950e-1340.34ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_THEMA3.950e-1340.34ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNE73.950e-1339.05ATP-dependent Clp protease proteolytic subunit 3 O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-007-A10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744296 ID=EY744296; Name=EY744296; organism=Citrus sinensis; type=EST; length=962bp
GAAAACTACAAGAATGTGCCCCGTCACCTTTATGGCCTTACACCTTCACA
GATGGACATGTTCATGACAGAAGAGAACCCTGTGTGCCGGCAAGCAGCGA
GTGTAACAGAGGAAACCATTTCTTCTGCCCACCATTATTTGAATAATGGG
GGGATGTGGAGTCTATCTGGCATGAGTGATAGGGGCCCTTCAAAGTATAG
TATGAGTGTGAGCATGTATCGTGGAGGAGGTGGAGTATATGATATGCCCC
AATCTGCTCCTCCTGACTTACCTTCTTTGCTGTTAGATGCTCGGATTGTC
TATCTTGGAATGCCGATTGTATCTGCAGTGACTGAGCTTCTTATTGCTCA
GTTTATGTGGTTGGATTTTGATAATGCCTCAAAGCCTATATATCTATACA
TAAATTCCTCTGGGACACAGAATGAAAAGAAGGAGAGTGTTGGAGCCGAA
ACTGATGCATATGCTATAGCTGATGCCATGGCTTACTGCAAATCAAAAGT
CTATACAGTAAATTGTGGCATGGCATATGGTCAAGCAGCAATGCTTCTAT
CTGTTGGAGCAAAGGGTTACCGCGGTTTACAGCCAAATTCTTCCACAAAA
TTATATTTGGCCTGTCCTTGGGAAGGCGAAGTGGCCCCCTTACTGGACTG
GGGGCCCAAGGCCAAAAATCTTAAAACCAACGCTTGAAAGCTACTTTGAG
CTTTTAGCCAAAAGGAAAAGGAAAACCCTAGGGAAAAATTTGCTAAAAAC
CTCCCACCAACCCTAATAACTTGCCCCACAAAAAAAACCTTTAAGTGAAT
TGGCCCTTCCCCAAATCAAAATATCCCACTTCTCCGGGAGCCGCCTATCC
TGAAAAACCGGGGATTTACCAATTATTTCTCTCTCTTACCCACAAAATGC
GCCCCGTGGAAGAAAAAAAACAAACGAGAGGGGCCCCCCGATCAAACCTT
CCTCTTCTGGGA
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