EY744284

Overview
NameEY744284
Unique NameEY744284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIOK1_HUMAN (Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.296e-24
Identity = 67/171 (39.18%), Postives = 96/171 (56.14%), Query Frame = 2
Query:  269 DSKDDDESVDGAFMLNSRRPNAHGGLHSRTNASTLQPLSNRNQKFTNHIRPSPLEEWEGRMNV---GMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQKLPGQVNKTSFLVFKDRKPECPRGFSF 772
            D  DDD   D      ++    +GG + + N  T    S +     + +    L ++E ++N+    +++SV   + E  R       +  +KADRATVEQ +DPRTRM+LFKML RG+  +INGCISTGKEANVYHA+ ++G+    ++ KTS LVFKDR       F F
Sbjct:   64 DDDDDDWDWDEGVGKLAKGYVWNGGSNPQANRQTSDSSSAKMSTPADKV----LRKFENKINLDKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFKDRDKYVSGEFRF 230          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIOK1_MOUSE (Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.609e-22
Identity = 67/174 (38.51%), Postives = 96/174 (55.17%), Query Frame = 2
Query:  260 DYLDSKDDDESVDGAFMLNSRRPNAHGGLHSRTNASTLQPLSNRNQKFTNHIRPSPLEEWEGRMNVGMSN---SVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQKLPGQVNKTSFLVFKDRKPECPRGFSF 772
            DY D  DDD  +D A    ++    +GG + + N  T    SN N    +      L ++E ++N+   N   SVT  +   +R       +  +KADRATVEQ +DPRTRM+LFK+L++    +I+GCISTGKEANVY+A+   G+    ++ KTS L+FKDR       F F
Sbjct:   62 DYDD--DDDWYLDDATGKLTKGCTWNGGSNYQANRQT----SNYNSAKMSTPIDKSLRKFENKINLNKLNVTDSVTNKVTVKLRQKEAESYRIKDKADRATVEQVLDPRTRMILFKLLHKDHISEIHGCISTGKEANVYYASTPSGESRAIKIYKTSILMFKDRDKYVTGEFRF 229          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIO1_DICDI (Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum GN=rio1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.341e-21
Identity = 66/172 (38.37%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  251 EALDYLDSKDDDESVDGAFMLNSRRPNAHGGLHSRTNASTLQPLSNR-NQKFTNHIRPSPLEEWEGRMNV-------GMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQKLPGQVNKTSFLVFKDR 742
            E ++Y     D+E+ D    + S  P             TLQP +    QK+ N I  + +        V        + NSV  +I+E  +       +  +K DRAT EQ +DPRTR++LFKM+N+G F +INGCISTGKEANVYHA   + ++   +V KTS LVFKDR
Sbjct:   62 EEIEYDSDLSDEENEDRILGIRSSIPLN----------KTLQPKAQALEQKYQNKINVNSIANSISSKRVIDDDSHRALPNSVQNSIKEIKKKDDKQGVRIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCISTGKEANVYHAFTPNEEERAVKVYKTSILVFKDR 223          

HSP 2 Score: 20.7866 bits (42), Expect = 1.341e-21
Identity = 7/16 (43.75%), Postives = 12/16 (75.00%), Query Frame = 3
Query:  735 RTENRNVPGDFRFQKG 782
            +  +R V G+FRF++G
Sbjct:  221 KDRDRYVTGEFRFRRG 236          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIO1_SCHPO (Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe GN=rio1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.656e-21
Identity = 64/165 (38.79%), Postives = 89/165 (53.94%), Query Frame = 2
Query:  248 GEALDYLDSKDDDESVDGAFMLNSRRPNAHGGLHSRTNASTLQPLSNRNQKFTNHIRPSPLEEWEGRMNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGQKLPGQVNKTSFLVFKDR 742
            G   DY   ++DD   + A    S R    G   S+ N+  +    +   ++ N+I+ +   E EG    G+    T      +      K+   +K+DRAT EQ +DPRTRM+L K++N G   +INGCISTGKEANVYHAT  DG+    ++ KTS LVFKDR
Sbjct:   24 GSDNDYF--REDDIDWNQASSNYSARQENFGNNSSKINS--VNDHVSTLSRYVNNIKLNDRFEAEGFRTRGLLILHTFTFSCLIVLTNKDKSSIKDKSDRATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHATNEDGKHFAIKIYKTSILVFKDR 184          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIO1_YEAST (Serine/threonine-protein kinase RIO1 OS=Saccharomyces cerevisiae GN=RIO1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.881e-14
Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  503 DMAIGKTKTS-EKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA-------------------TKSDGQKLPG--QVNKTSFLVFKDRKPECPRGFSF-PKRDTANP 796
            +++  + KTS +KA+RATVE  +DPRT   L  M+ RGV  D+NGC+STGKEANVYHA                    ++DG +     ++ KTS LVFKDR+      F F   R   NP
Sbjct:   36 ELSFSRAKTSKDKANRATVENVLDPRTMRFLKSMVTRGVIADLNGCLSTGKEANVYHAFAGTGKAPVIDEETGQYEVLETDGSRAEYAIKIYKTSILVFKDRERYVDGEFRFRNSRSQHNP 156          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIOK3_MOUSE (Serine/threonine-protein kinase RIO3 OS=Mus musculus GN=Riok3 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.756e-13
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  449 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA-------TKSDGQKLPGQ----VNKTSFLVFKDRKPECPRGFSFPKR 781
            M++ +SN V  A+++          +  EK + +T E+A+DP+TR++++KM+N G+   I GCISTGKE+ V+HA        K DG+ +P +    V KT+   FK+R       F F  R
Sbjct:  194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSLEDEKEDGKAIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDR 315          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIOK3_HUMAN (Serine/threonine-protein kinase RIO3 OS=Homo sapiens GN=RIOK3 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.138e-12
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 2
Query:  449 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA-------TKSDGQKLPGQ----VNKTSFLVFKDRKPECPRGFSFPKR 781
            M++ +SN V  A+++          +  EK + +T E+A+DP+TR++++KM+N G+   I GCISTGKE+ V+HA        K D + +P +    V KT+   FK+R       F F  R
Sbjct:  194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDR 315          
BLAST of EY744284 vs. ExPASy Swiss-Prot
Match: RIOK3_BOVIN (Serine/threonine-protein kinase RIO3 OS=Bos taurus GN=RIOK3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.486e-12
Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 2
Query:  449 MNVGMSNSVTTAIRESVRDMAIGKTKTSEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHA-------TKSDGQKLPGQ----VNKTSFLVFKDRKPECPRGFSFPKR 781
            M++ +SN V  A+++          +  EK + +T E+A+DP+TR++++KM+N G+   I GCISTGKE+ V+HA        K D + +P +    V KT+   FK+R       F F  R
Sbjct:  194 MDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDGKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDR 315          
The following BLAST results are available for this feature:
BLAST of EY744284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RIOK1_HUMAN1.296e-2439.18Serine/threonine-protein kinase RIO1 OS=Homo sapie... [more]
RIOK1_MOUSE4.609e-2238.51Serine/threonine-protein kinase RIO1 OS=Mus muscul... [more]
RIO1_DICDI1.341e-2138.37Serine/threonine-protein kinase rio1 OS=Dictyostel... [more]
RIO1_SCHPO6.656e-2138.79Serine/threonine-protein kinase rio1 OS=Schizosacc... [more]
RIO1_YEAST7.881e-1441.32Serine/threonine-protein kinase RIO1 OS=Saccharomy... [more]
RIOK3_MOUSE1.756e-1335.25Serine/threonine-protein kinase RIO3 OS=Mus muscul... [more]
RIOK3_HUMAN1.138e-1234.43Serine/threonine-protein kinase RIO3 OS=Homo sapie... [more]
RIOK3_BOVIN1.486e-1234.43Serine/threonine-protein kinase RIO3 OS=Bos taurus... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-H10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744284 ID=EY744284; Name=EY744284; organism=Citrus sinensis; type=EST; length=956bp
CCACGCGTCCGGCAGTGTCAAATACCCTAAATTTTGAAAACCCTAGCTCG
AACTGAGCAAGAAGCACGGCCAGCCTCGAACAACCAGCCGTATTTCAAAG
CCGAGCTCAATAGGAAAAGTAGAAATGTCTGTAGTAGACGAAAAACCATT
GGTAGTGGATAAAGCGAACAATGAAGAGGAAGCAGAAGAACAAATAGAAG
AAGAGGAAGACGATGAAGAGCTATCATGGTCGTCGGATTCTGAAATTGGA
GAGGCTTTGGATTATTTGGACTCTAAGGACGATGATGAATCGGTGGATGG
GGCTTTTATGCTCAATTCAAGACGGCCCAATGCGCACGGAGGGCTTCACT
CTCGCACTAATGCATCAACGCTCCAACCTTTATCCAATAGGAATCAGAAG
TTTACCAATCACATTCGACCTTCGCCTTTAGAGGAATGGGAGGGGAGGAT
GAATGTTGGCATGTCGAATTCTGTGACAACTGCAATCCGTGAAAGTGTCC
GAGACATGGCCATTGGTAAAACTAAAACCTCTGAGAAAGCAGATCGTGCG
ACTGTTGAACAGGCTATTGACCCTAGGACTCGTATGGTTTTATTCAAAAT
GCTGAATCGGGGTGTATTCCATGATATCAATGGCTGCATTTCTACGGGAA
AAGAAGCCAACGTTTATCATGCAACAAAATCTGATGGTCAGAAACTACCT
GGCCAAGTGAACAAAACTTCCTTTCTGGTTTTTAAGGACCGAAAACCGGA
ATGTCCCAGGGGATTTTCGTTTCCAAAAAGGGATACCGCAAACCCAATCC
CAAGAAAAAAGGGGAAAACCTTGGGGTGGAAAAAAAAAAGGAGGAAATTT
TTAAAAAACTGAAGGGGGCCTGGGGAATTAAGGGGGCCCCCCCTTCCCAT
TTTTTTTTGGAAAACTCCTGGTTTTTGGGGTTTTGGGGAAATTTTTAAAA
GAAAAG
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