EY744280

Overview
NameEY744280
Unique NameEY744280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length991
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744280_ssr200 microsatellite EY744280_ssr200:200..211. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12875 contig Csv1_Contig12875:1..991. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI8_ARATH (Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana GN=ARI8 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.078e-53
Identity = 98/170 (57.65%), Postives = 126/170 (74.12%), Query Frame = 2
Query:  233 DPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNMDGMVGP*RKQEKVFSF 742
            D   DD D+  FRR+Q +Y+VL EADI   QEDDI+++STVLSISR  ++ILLRHYNW VS+VHD WFADE+ VR +VG L+KPVV+F    E  CGICF+T+  DK+ +AACGH FC +CW GYI   + DGPGCL L+ PDPSC AAVGQ+M  ++ P + ++K  S+
Sbjct:   33 DDAADDSDDLIFRRRQQNYSVLSEADICKLQEDDISRISTVLSISRNSSAILLRHYNWCVSRVHDEWFADEEKVRDAVGLLEKPVVDFPTDGELDCGICFETFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVGQDMINLLAPDKDKQKYTSY 202          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI7_ARATH (Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana GN=ARI7 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.589e-49
Identity = 102/213 (47.89%), Postives = 129/213 (60.56%), Query Frame = 2
Query:   92 MDSEEDDFYSGEAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIEEDPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNMDGMVGP*RKQEK 730
            M+S EDDFYSG                                F+EED D  D    +  R Q ++ VLRE DI+  Q D+I +VS VLSI+ V+ASILLRH++WSV +VHD WFADE+ VRK+VG L+  VV  S+  E TCGICFD+Y  +K+ S +CGH FC  CW GYI  T+ DGPGCLML+ PDPSC AAVG +M   +    ++EK
Sbjct:   13 MESGEDDFYSGGT----------------DDCNDSDDGEPDYGFVEEDAD--DSAMIASHRSQKNFCVLREEDIRRHQMDNIERVSVVLSITEVEASILLRHFHWSVGRVHDEWFADEERVRKTVGILESHVVPPSDDSELTCGICFDSYPPEKIASVSCGHPFCTTCWTGYISTTINDGPGCLMLRCPDPSCLAAVGHDMVDKLASEDEKEK 207          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI5_ARATH (Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana GN=ARI5 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.364e-48
Identity = 89/170 (52.35%), Postives = 120/170 (70.59%), Query Frame = 2
Query:  233 DPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNMDGMVGP*RKQEKVFSF 742
            + D DD    +  R + +Y VL+E DI+  Q DD+ +VS VLSI+ V+AS LL HY+WSVSKV+D WFADE+ VR++VG L+ PVV   + RE TCGICFD+Y+ +++VS +CGH FC  CW GYI  T+ DGPGCLMLK PDPSC AA+G++M   +     +EK + +
Sbjct:   37 EADTDDAAIIASYRSKSNYVVLKEEDIRRHQNDDVGRVSAVLSITDVEASTLLLHYHWSVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDMIDKLASKEDKEKYYRY 206          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI6_ARATH (Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana GN=ARI6 PE=5 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.038e-44
Identity = 82/158 (51.90%), Postives = 112/158 (70.89%), Query Frame = 2
Query:  221 FIEEDPDHDDFDNASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNM 694
            ++  + D DD    ++ R Q +Y VL+E DI+  Q+DD+ +VS VLSI+ V AS+LL HY+WSVSKV+D WFADED VR++VG L+ P     + RE TCGICF++Y  ++ +S +CGH FC  CW GYI  ++ DGPGCLMLK P P C AA+G++M
Sbjct:   37 YVFGEADTDDAAIIAYHRSQINYVVLKEEDIRRHQKDDVGRVSVVLSITDVQASLLLLHYHWSVSKVNDEWFADEDRVRRTVGILEGPA---PDGREFTCGICFESYPLEETISVSCGHPFCATCWTGYISTSINDGPGCLMLKCPYPCCPAAIGRDM 191          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI11_ARATH (Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana GN=ARI11 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 6.136e-41
Identity = 75/169 (44.38%), Postives = 116/169 (68.64%), Query Frame = 2
Query:  245 DDFD--NASFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAR-EPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNMDGMVGP*RKQEKVFSF 742
            DD++  + +  R + SY V++E DI   Q DDI +VSTVLS+S+V++ +LL HY+W VSK+ D WF DE+ +RK+VG L +PVV+ +    +  CGICF++Y+  ++   +CGH +C+ CW GYI   ++DGPGCL +K P+PSC+A VGQ+M   V   + ++K + +
Sbjct:   45 DDYNPVDDTISRSEKSYVVVKEEDILKLQRDDIEQVSTVLSVSQVESIVLLLHYHWCVSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIARVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRY 213          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI9_ARATH (Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana GN=ARI9 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.977e-40
Identity = 73/162 (45.06%), Postives = 110/162 (67.90%), Query Frame = 2
Query:  239 DHDDFDNA--SFRRQQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAREP--------TCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNM 694
            + DD+++   +    + SY +L+E DI   Q DDI +VS++LS+S+V+  +LL HYNW VSKV D WF DE+ +RK+VG L +PVV+F+   +          CGICF++Y+ +++   +CGH +C+ CW GYI   ++DGPGCL +K P+PSC AAVG++M
Sbjct:   25 ESDDYNDVVDTIIPSEKSYVILKEEDILKLQRDDIERVSSILSLSQVEVIVLLLHYNWCVSKVEDEWFTDEERIRKAVGLLKEPVVDFNGGEKDKKCRKVNIQCGICFESYTREEIARVSCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 186          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI10_ARATH (Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana GN=ARI10 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.861e-40
Identity = 70/156 (44.87%), Postives = 109/156 (69.87%), Query Frame = 2
Query:  278 QHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGFLDKPVVEFSNAR-EPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQNMDGMVGP*RKQEKVFSF 742
            + SY +++E +I   Q DDI +VST+L +S+V+A +LL HY+W VSK+ D WF DE+ +RK+VG L +PVV+ +    +  CGICF++Y+  ++ S +CGH +C+ CW GYI   ++DGPGCL +K P+PSC+A VGQ+M   V   + ++K + +
Sbjct:   40 EKSYVIIKEEEILKLQRDDIERVSTILFLSQVEAIVLLLHYHWCVSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRY 195          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: ARI12_ARATH (Probable E3 ubiquitin-protein ligase ARI12 OS=Arabidopsis thaliana GN=ARI12 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.798e-16
Identity = 52/147 (35.37%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  275 QQHSYTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWFADEDAVRKSVGF--LDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGC---LMLKSP-----DPSCWAAVG 685
            Q++  TVL E DI+   E D+  VS   S+S+ +A++LL H  W+V  +   W A   +VR SVG   LD P    S+  E  CG C +++    + S +CGH  C  CW  +I   + + P     L LK P       SC A+VG
Sbjct:   35 QRNYATVLTEEDIRALMEIDVQSVSDFTSLSKAEATLLLSHLRWNVDCICKQWSAGAQSVRDSVGLLELDPP----SDDNEYFCGACGESHPHKNLASVSCGHRICTRCWTSHINKIISEKPAAEWNLWLKCPVRVGLHASCPASVG 177          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: RBRA_DICDI (Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium discoideum GN=rbrA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.021e-11
Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 2
Query:  248 DFDNASFRR------QQHSYTVLREADIKCQQEDDITKVSTVLSI-SRVDASILLRHYNWSVSKVHDAWFADE-----DAVRKSVGFLDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSCWAAVGQN 691
            DFD    +R      +Q S+ VL + D+  +    I +V  VLSI S    S LLRH  W+  K+ + +  +      DA   +V  L+  +VE S     +C IC + Y   +  +  C H +C  C++ Y+   V +GP C+    P P C   V Q+
Sbjct:   39 DFDENQPQRSLGKLTRQKSFEVLNKDDLFSESHKIIKEVKDVLSIPSEAAVSTLLRHMKWNKEKLIERYMENPEKLCIDAGVPNVMKLNATIVEKSG--NVSCLICLEDYPPTQTFALICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVIVHQD 196          
BLAST of EY744280 vs. ExPASy Swiss-Prot
Match: YKX2_SCHPO (Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces pombe GN=SPAC328.02 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.617e-11
Identity = 42/148 (28.38%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  239 DHDDFDNASFRRQQHS--YTVLREADIKCQQEDDITKVSTVLSISRVDASILLRHYNWSVSKVHDAWF-ADEDAVRKS-VGFLDKPVVEFSNAREPTCGICFDTYSCDKVVSAACGHHFCRACWRGYIGATVKDGPGCLMLKSPDPSC 670
            D D F     RR+ HS  Y V+   D++    + I ++++++ ++R     L R++ W+  ++ + +  A E++++K+ VG       E  +  E TC IC+D   C    SA C H FC AC+R Y+ + + +G    +++ P+ SC
Sbjct:   35 DDDGFTVERKRRRAHSVSYRVVSVRDLRASLNEKINQLTSIIDLTREQVLGLYRYFKWNRERLLERYIDAPEESLQKAGVGLSGSKQREVVH-HEGTCEICYDE-GCLPFFSAECDHEFCLACYRQYLDSRISEGES--VIQCPEESC 178          
The following BLAST results are available for this feature:
BLAST of EY744280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ARI8_ARATH1.078e-5357.65Probable E3 ubiquitin-protein ligase ARI8 OS=Arabi... [more]
ARI7_ARATH3.589e-4947.89Probable E3 ubiquitin-protein ligase ARI7 OS=Arabi... [more]
ARI5_ARATH1.364e-4852.35Probable E3 ubiquitin-protein ligase ARI5 OS=Arabi... [more]
ARI6_ARATH2.038e-4451.90Putative E3 ubiquitin-protein ligase ARI6 OS=Arabi... [more]
ARI11_ARATH6.136e-4144.38Probable E3 ubiquitin-protein ligase ARI11 OS=Arab... [more]
ARI9_ARATH3.977e-4045.06Probable E3 ubiquitin-protein ligase ARI9 OS=Arabi... [more]
ARI10_ARATH8.861e-4044.87Probable E3 ubiquitin-protein ligase ARI10 OS=Arab... [more]
ARI12_ARATH1.798e-1635.37Probable E3 ubiquitin-protein ligase ARI12 OS=Arab... [more]
RBRA_DICDI1.021e-1130.00Probable E3 ubiquitin-protein ligase rbrA OS=Dicty... [more]
YKX2_SCHPO6.617e-1128.38Uncharacterized RING finger protein C328.02 OS=Sch... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-H06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744280 ID=EY744280; Name=EY744280; organism=Citrus sinensis; type=EST; length=991bp
ACAATTCTTTTTCCTTTTGTTTTGTTTTTGTTTTCTTTTTAATTTTCTCT
CCATCCAAACAAGACCTTCGCTAGGGTTTTCGAGTTGGCGCATGGATTCT
GAGGAGGATGATTTCTACAGCGGCGAGGCAATGGACGATGACAACGATTA
CTACAACTCCGACGATGCCGCCGCCGATTACGGCGTCGAAGATGACGAAG
ACGACGACGACGGTTACGGGTTCATCGAGGAGGATCCTGATCATGATGAT
TTCGATAATGCCTCCTTCCGTCGCCAGCAGCATAGTTACACCGTATTGAG
GGAAGCAGATATAAAATGTCAGCAGGAGGATGATATTACAAAAGTTTCTA
CTGTCCTTTCAATATCAAGAGTAGATGCAAGTATCCTACTCCGCCATTAT
AACTGGAGTGTTAGTAAAGTGCATGATGCATGGTTCGCTGATGAAGATGC
AGTTCGGAAATCAGTTGGCTTTTTGGACAAACCAGTTGTTGAGTTCTCCA
ATGCTAGAGAACCAACTTGTGGGATTTGTTTTGATACCTATTCATGTGAC
AAAGTTGTGTCAGCGGCTTGTGGTCATCACTTTTGCCGTGCATGCTGGAG
AGGTTATATTGGTGCGACAGTTAAAGATGGTCCGGGGTGCCTGATGCTTA
AAAGTCCTGATCCATCTTGCTGGGCTGCTGTTGGTCAAAACATGGATGGA
ATGGTGGGCCCCTGAAGAAAACAAGAAAAAGTATTCTCGTTTCCCTTCTT
TAATTTTATGTTCCAAAAACATAAAAAAAACCCAAGTGGGGGTCCCTGGC
CCCCAGGGGGGCGACGCAGGGTTTTTTGTTTTTTTGCCCCCGGGGAATTG
GAAAATTTTTTGTTTTTTTCTCTGGGTTTTTGGCTCCATATATAATTTTC
CCGGCGGGGAAATTTGCCCCCTGGGAGGAAAAACCTCCCCACCCCCCCCC
CCGGGGGGAAATATGGGGGCGGGCCCCCCTTCGGGGCGCCC
back to top