EY744277

Overview
NameEY744277
Unique NameEY744277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744277_ssr345 microsatellite EY744277_ssr345:345..356. BLAST: Citrus ESTs to Prunus persica proteins V1
EY744277_ssr30 microsatellite EY744277_ssr30:30..41. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            +C+CK GLS +VLQ  +DYACG GADC P      C+NP+ V+ HCNYAVNS+FQ+KGQ+PGSC+F
Sbjct:   21 WCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNF 86          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.655e-20
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            +C+CK GLS SVLQK +DYACG GADC P    G C+NP+ V+ HCNYAVNS+FQ+KGQ   SC+F
Sbjct:   21 WCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNF 86          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E13L4_ARATH (Glucan endo-1,3-beta-glucosidase-like protein At1g69295 OS=Arabidopsis thaliana GN=At1g69295 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.389e-19
Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            YCLCK+G ++ VLQKAIDYACG GADCT I   G C+ PNTV++HC+ AVNSY+Q+K  +  +CDF
Sbjct:   21 YCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPNTVKNHCDVAVNSYYQKKASSGATCDF 85          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAG-ADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            YC+   G+    LQ A+D+ACG G ++C+ I     C+ PN V+ H ++A NSY+Q++G+  GSCDF
Sbjct:  272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDF 338          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            +C+ K+G +   LQ ++D+ACG G DC  I   G C+ PN V  H  YA+N YFQ+  + P  CDF
Sbjct:  364 WCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDF 429          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 28/67 (41.79%), Postives = 45/67 (67.16%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAG-ADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            +C+ K+ + + +LQ A+D+ACG G  DC+ ++Q   C+ P+ V  H  YA N+Y+Q+ G+  GSCDF
Sbjct:  360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDF 426          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAGA-DCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            YC  ++G    +LQ A+D+ACG G  DC+PI Q   C+ P+ V  H NYA ++Y+ + G  P +C+F
Sbjct:  368 YCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNF 434          
BLAST of EY744277 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 29/66 (43.94%), Postives = 43/66 (65.15%), Query Frame = 3
Query:    6 YCLCKQGLSQSVLQKAIDYACGAGADCTPILQNGVCWNPNTVQDHCNYAVNSYFQRKGQTPGSCDF 203
            +C+ K G + + LQ  I+YACG   DC PI   G C++PN++Q H +Y +N+Y+Q  G T  +CDF
Sbjct:  377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDF 441          
The following BLAST results are available for this feature:
BLAST of EY744277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
E13L2_ARATH7.427e-2162.12Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]
E13L3_ARATH1.655e-2063.64Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]
E13L4_ARATH2.389e-1962.12Glucan endo-1,3-beta-glucosidase-like protein At1g... [more]
E131_ARATH8.231e-1243.28Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E137_ARATH1.404e-1143.94Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E133_ARATH1.404e-1141.79Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E132_ARATH2.395e-1141.79Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E13B_WHEAT4.085e-1143.94Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-H03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744277 ID=EY744277; Name=EY744277; organism=Citrus sinensis; type=EST; length=864bp
CACTTTATTGCTTGTGCAAACAAGGGTTGAGTCAGTCAGTCCTCCAGAAA
GCTATAGACTATGCTTGTGGAGCCGGAGCTGACTGTACTCCAATCCTCCA
AAACGGTGTGTGTTGGAACCCCAACACGGTGCAAGATCACTGCAACTATG
CCGTTAACAGCTATTTCCAGAGAAAGGGCCAAACTCCTGGAAGCTGTGAT
TTTGCAGGCGCTGCTGCCACTAGTCCCAATCCCCCTCCCAATGCCGCCGG
CGGTTGTGTTTACCCATCAACTGGCAGCCCCGGGACAGGCACAGGCACAG
GCACAGGCGCAGGCACACCAACCACCACACCGACTACAACACCAACGACG
ACGACGCCTACAGGCACAAGCCCGGGCACATCCACGGTATTCGGTGGCAC
TGGCAGCTCGCTGGGCCCAACCGGCACCACTGGCATCAATGACTCTAGTA
GCGTGGCTCTCTTTAAACTCACTAACTTTTTCTTCTCTTTTGCTCTGACT
CTCTGGGTTTCATGCCTAGTGCTGCTGGTGTGGGGCTGAAAGATACATTT
CGGAAAAAATAAAGGCGGGGTCTGATGTGCGGACCAGATTTTGCCACGAC
AATATGGGTAGCCTTGTAATTTCATAAGGGTTGGTGAGGAGGGAAGGGGT
TCATCCTAAAAGGCAAACCGCACTATGGCTTTTTTGTTTTGTTTTCTTAC
CTGGGGGAAAAACCGGGGAAATTCCATTCCTTTTTGGGCCTTTTGGGGGA
AGAAATTTACAAACCATTTTGCGGGAAAAACCCTGATTTCCCCTCCCTTT
AAATTTTTTCCCCTTTTCGGAACTTTGAGGGGAAAAGGGGAATATTTTTT
TTTTTTTTTTTTCT
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