EY744263

Overview
NameEY744263
Unique NameEY744263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length982
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744263 vs. ExPASy Swiss-Prot
Match: YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 7.146e-42
Identity = 94/147 (63.95%), Postives = 105/147 (71.43%), Query Frame = 2 
Query:  281 KRHGWKIAFALDTGG-ISGSGGQ-ESLNGDGPDLGGTRLGRIVSAGGRQLLEKLNIARKNLPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKKPPSS--TGELQPFVVMKNYWKAGVCLRPLCGSFLTGN 709
            +R   KIAFALDTG  I G  G+ + +NGD   LG TRLGRI  AGG+QLL K+N ARKN PMKIFLLLLGFYTANALATILGQTGDWD          IEGIGMLMYKKP SS  +G+LQ FVV  N+WKAGVCL     +F  G+
Sbjct:   51 RRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197
The following BLAST results are available for this feature:
BLAST of EY744263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YC20L_ARATH7.146e-4263.95Ycf20-like protein OS=Arabidopsis thaliana GN=At1g... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-F10-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744263 ID=EY744263; Name=EY744263; organism=Citrus sinensis; type=EST; length=982bp
CCACGCGTCCGCTGAACCCACCTGTTAACTCATCTCCGTGTGTGCGCGCA
TGTGGTGGCTGTACATATAAACAAAATCTCAATTGTCAAGTTTATATGCT
TGTAGCTGGCGTCAAATGGGAGCACTGCCATTGCACTCAAGTTTGTTGAT
ACTAGAGAGTGATGTCTTTGAAAGTTCTTATATAAGGCTTGCAGTTAGTG
CAAACCAGAAGTGGAAAAATGAAACTAGTACAAGTGGACAGACTTCAAAG
ATCGGTTCAAAGTCTGCTTGTTTTCTCGGAAAGAGACATGGCTGGAAAAT
AGCATTTGCATTGGACACAGGCGGAATATCTGGGAGTGGCGGACAAGAGA
GCCTCAATGGTGATGGTCCTGATCTTGGTGGCACTAGATTGGGAAGGATA
GTTAGTGCAGGTGGTAGACAGCTACTGGAGAAGCTGAACATAGCGAGAAA
GAACCTTCCAATGAAGATATTTCTCCTGCTATTGGGTTTCTACACAGCAA
ATGCTCTAGCTACGATCCTTGGACAGACAGGTGACTGGGATGTACTGGTT
GCAGGTGTTGTAGTTGCTGCCATTGAAGGGATAGGTATGCTTATGTACAA
AAAGCCACCGTCGTCAACTGGGGAGCTGCAACCCTTTGTGGTGATGAAGA
ACTATTGGAAAGCTGGGGTGTGCTTAAGGCCTCTTTGTGGAAGCTTTTTA
ACTGGGAATTTATTAACCTACCAATAAGGTATGTCCCCCAGCCAGAATTC
CAAATCTTTTTCCTTTATGTTAAAAAAAGCCCCTGCCGGCCGTAACCTAA
TTTCAAGGAAAGGTTAAAAAAAAACTAGGGCCCTGGAAAATTCTTTTTCT
TTTTCAATTTGCAATTTTGGGGTAAACCATTTCACCCAAAAAAAAACCGG
CCCCCCAAAAATTCCCCTTTGTCCCCCCACAAAATTCCCCAAAAAAAGCC
AAAGAGGGAAGAATGTGGGGAGCGCCCCTTTT
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