EY744256

Overview
NameEY744256
Unique NameEY744256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744256 vs. ExPASy Swiss-Prot
Match: TAD2B_ARATH (Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.831e-39
Identity = 97/222 (43.69%), Postives = 124/222 (55.86%), Query Frame = 3
Query:   12 ERKRRKDFILERNLLYPNPFEKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLELXXXXXXXXXXXXXXXXXXXXXXXXXXXNVFMASESLRKDSNSRPSGQASSSHVNDLYIMGFNETQLLSEAVSF*SIVFFLCPP*NEHL*PS*HCHFGRRTAHAGRSG*LPLYILGCKRVMSREIFRGNGHNKADA 677
            ERKRRK+FI+ERNLLYPNPFEKDLS EE+  CRR DVFMRFHSKE+H++LL+ V+SE+R +KR++DLKEA+ AGCR++AEA+RYL                                     +  +  SRP  QASSS+VNDL ++GF E+QLLSE+         L PP                              L  ++VMS EIF+GN   K+DA
Sbjct:  282 ERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFG--------------QIAGEMGSRPPVQASSSYVNDLDLIGFTESQLLSESEKRLCSEVKLVPP----------------------------VYLQMQQVMSHEIFKGNVTKKSDA 461          
BLAST of EY744256 vs. ExPASy Swiss-Prot
Match: TADA2_ORYSJ (Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica GN=ADA2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 2.112e-24
Identity = 53/86 (61.63%), Postives = 71/86 (82.56%), Query Frame = 3
Query:   12 ERKRRKDFILERNLLYPNPFEKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLE 269
            ERKRRK+FILERNLL+PNP EKDL+ E++E+  RY VFMRF SKE+HE L+++V+ E +  +RIQ+L+E R+AGCRT AEA  ++E
Sbjct:  327 ERKRRKEFILERNLLFPNPLEKDLTNEDKEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEAKIHIE 412          
BLAST of EY744256 vs. ExPASy Swiss-Prot
Match: TAD2A_ARATH (Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.602e-24
Identity = 50/86 (58.14%), Postives = 72/86 (83.72%), Query Frame = 3
Query:   12 ERKRRKDFILERNLLYPNPFEKDLSPEERELCRRYDVFMRFHSKEDHEDLLQTVISEHRTLKRIQDLKEARAAGCRTSAEADRYLE 269
            ERKRRK+F+LERNLLYP+ +E  LS EER++ +   VF RF SKE+H++L++ VI EH+ L+RI+DL+EAR AGCRT+++A+R++E
Sbjct:  324 ERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIE 409          
The following BLAST results are available for this feature:
BLAST of EY744256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TAD2B_ARATH8.831e-3943.69Transcriptional adapter ADA2b OS=Arabidopsis thali... [more]
TADA2_ORYSJ2.112e-2461.63Transcriptional adapter ADA2 OS=Oryza sativa subsp... [more]
TAD2A_ARATH3.602e-2458.14Transcriptional adapter ADA2a OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-F03-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744256 ID=EY744256; Name=EY744256; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGGAGAGGAAGCGTAGAAAGGATTTCATACTAGAAAGAAAT
TTGTTATACCCAAATCCTTTTGAGAAGGATTTGTCCCCTGAAGAGAGGGA
GCTATGTCGGCGTTATGATGTCTTCATGCGTTTTCATTCAAAGGAAGACC
ATGAGGATTTGCTTCAGACTGTTATTTCAGAGCACCGAACTCTGAAAAGA
ATTCAAGACCTTAAGGAAGCCCGAGCTGCTGGGTGCCGTACATCTGCTGA
GGCAGATAGATACCTTGAACTGAAAAGGGGAAGGGAAGCTGAAGAAGCTT
CTCGCAGAGCAAAAGAAGGTGGCCATGCTGGCGCAAGCAGTCAGGGTGGT
GCAAATGTGTTCATGGCTTCAGAGTCTCTTCGCAAAGATTCAAATTCAAG
ACCTTCAGGACAGGCTTCTTCAAGCCATGTAAATGATTTGTATATAATGG
GATTCAATGAAACACAATTACTGTCTGAAGCTGTAAGTTTCTAATCCATC
GTTTTCTTTCTTTGTCCGCCGTAAAATGAACACTTGTAACCTAGCTAGCA
TTGTCATTTTGGCAGGAGAACCGCCCATGCTGGGAGATCAGGGTAGCTCC
CCCTCTATATCTTAGGATGCAAGAGGGTCATGTCCAGGGAGATCTTCCGC
GGCAATGGCCATAATAAAGCTGATGCCCCTCCCTTGGTTCAAGATTGAAA
CCAGCAAAAATTGAATGGGTTTAAGAAAAGGCTTGGTCAAAAAGGGGGCT
TGGCCCCCCCCATGGAAACCCCTTTTTTATATTTCTATTGGCTTGGTTCC
AAAATTGGTAAAAAAAAAATTATTCCCCTCCCCGGTATTCTCTTTGGCCG
CCCCTTTCCAAAAAAGGGAAAAAAAAAAAATTTTTTTTTTTTCACAAAAA
AAAAAAAAAAAAAAAAAAAAAAATAAAAA
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