EY744255

Overview
NameEY744255
Unique NameEY744255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744255 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.260e-42
Identity = 88/209 (42.11%), Postives = 128/209 (61.24%), Query Frame = 3
Query:   15 EPETFEEA---SQSSEWMTAMKDEITALEQNQTWELVPKPKDVKPISCRWVYKIKHCPDGSIERYKARLVARGFSQQYGLDYDETFSPXXXXXXXXXXXXXXXNKSWNLWQMDVKNAFLHGELDREIYMIQPMGFQNRGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTSADSSL-FAKANGKRIAIVLVYVDDLIITGDE 629
            EPE+ +E     + ++ M AM++E+ +L++N T++LV  PK  +P+ C+WV+K+K   D  + RYKARLV +GF Q+ G+D+DE FSP               +    + Q+DVK AFLHG+L+ EIYM QP GF+  G    VCKL K+LYGLKQAPR WY K   F+    Y  T +D  + F + +     I+L+YVDD++I G +
Sbjct:  810 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKD 1018          
BLAST of EY744255 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 3.111e-33
Identity = 81/209 (38.76%), Postives = 116/209 (55.50%), Query Frame = 3
Query:   18 PETFEEAS---QSSEWMTAMKDEITALEQNQTWELVPKPKDVKPISCRWVYKIKHCPDGSIERYKARLVARGFSQQYGLDYDETFSPXXXXXXXXXXXXXXXNKSWNLWQMDVKNAFLHGELDREIYMIQPMGFQNRGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTSADSSLFA--KANGKRIAIVLVYVDDLII-TGD 626
            P +F+E       S W  A+  E+ A + N TW +  +P++   +  RWV+ +K+   G+  RYKARLVARGF+Q+Y +DY+ETF+P                 +  + QMDVK AFL+G L  EIYM  P G     + + VCKL KA+YGLKQA R W+    + L +  +  +S D  ++   K N      VL+YVDD++I TGD
Sbjct:  891 PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS--CNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGD 1097          
BLAST of EY744255 vs. ExPASy Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.650e-16
Identity = 38/85 (44.71%), Postives = 58/85 (68.24%), Query Frame = 3
Query:   15 EPETFEEASQSSEWMTAMKDEITALEQNQTWELVPKPKDVKPISCRWVYKIKHCPDGSIERYKARLVARGFSQQYGLDYDETFSP 269
            EP++   A +   W  AM++E+ AL +N+TW LVP P +   + C+WV+K K   DG+++R KARLVA+GF Q+ G+ + ET+SP
Sbjct:   27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSP 111          

HSP 2 Score: 21.557 bits (44), Expect = 7.650e-16
Identity = 14/44 (31.82%), Postives = 19/44 (43.18%), Query Frame = 1
Query:  310 QPTKAGTCGRWT*RMPFSMESWIERST*FNRWVFRTEVILSMCV 441
            Q  + G    W  +M FSM  + ++    N  V R   I  MCV
Sbjct:  126 QQLEVGQSINWMFKMHFSMGIFKKKFICINLLVLRILFIHPMCV 169          
BLAST of EY744255 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.954e-12
Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = 3
Query:  339 MDVKNAFLHGELDREIYMIQPMGFQNRGHPEYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVTSADSSLFAKANGKRIAIVLVYVDDLIITGDEVEKFSEQRKTWQFLFN*K 683
            MDV  AFL+  +D  IY+ QP GF N  +P+YV +L   +YGLKQAP  W   I   L + G+     +  L+ ++       + VYVDDL++     + +   ++    L++ K
Sbjct:    1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMK 115          
The following BLAST results are available for this feature:
BLAST of EY744255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
POLX_TOBAC1.260e-4242.11Retrovirus-related Pol polyprotein from transposon... [more]
COPIA_DROME3.111e-3338.76Copia protein OS=Drosophila melanogaster GN=GIP PE... [more]
M820_ARATH7.650e-1644.71Uncharacterized mitochondrial protein AtMg00820 OS... [more]
YCH4_YEAST3.954e-1233.04Putative transposon Ty5-1 protein YCL074W OS=Sacch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-F02-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744255 ID=EY744255; Name=EY744255; organism=Citrus sinensis; type=EST; length=900bp
AAGCAACTGGAATAGAACCTGAGACGTTCGAAGAAGCGTCACAGAGTTCT
GAGTGGATGACAGCTATGAAAGACGAGATCACTGCACTTGAGCAAAATCA
GACCTGGGAACTCGTGCCAAAGCCAAAAGATGTGAAACCCATATCCTGCA
GATGGGTTTACAAAATAAAGCACTGTCCAGATGGGTCAATCGAGAGGTAC
AAGGCTCGATTGGTAGCTCGTGGTTTCTCTCAACAATATGGACTAGATTA
TGACGAAACGTTTAGTCCAGTGGCAAAACTTACAACCGTCCGAGTCTTAC
TTGCACTTGCAGCCAACAAAAGCTGGAACTTGTGGCAGATGGACGTGAAG
AATGCCTTTCTCCATGGAGAGCTGGATAGAGAGATCTACATGATTCAACC
GATGGGTTTTCAGAACCGAGGTCATCCTGAGTATGTGTGTAAACTGCGAA
AGGCTCTCTACGGACTAAAACAAGCACCCAGGGCGTGGTATGGCAAGATT
GCTGAATTTCTAACTCAAAGTGGGTATTCAGTAACATCTGCAGACTCCAG
CTTGTTTGCTAAAGCTAATGGAAAAAGGATAGCTATTGTGCTCGTGTACG
TAGATGATCTAATCATCACTGGAGATGAAGTTGAAAAATTTTCCGAACAA
AGGAAAACTTGGCAGTTCCTTTTCAATTGAAAAACTTGGACAACTTAACC
ATTTCCTTGGGGCAAGGGTTGATCAAAAAAAAAAAGGGATTTTTCTTTTT
CAACAAAAATTGCCCAAAAATTTTTTGAAAAAATTTGGGAGGGGCTAAAA
TGAAACCCCAATCCCACCCCCCAAGGGAACCCAATTGCCCAAAATGTTGG
CCCATAAAGGGCAAAAAACCGGGAAAAAAGCCCCCACATTTATCCCACAA
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