EY744242

Overview
NameEY744242
Unique NameEY744242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.979e-82
Identity = 146/159 (91.82%), Postives = 152/159 (95.60%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDENLL Q+KDGF+ GKDLVVSV  AMG+EQINA+KD+G K
Sbjct:    1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.968e-81
Identity = 147/159 (92.45%), Postives = 151/159 (94.97%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTDENLLSQIKDGF  GKDLVVSV  AMG+E+I +LKDIGPK
Sbjct:    1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.968e-81
Identity = 145/159 (91.19%), Postives = 152/159 (95.60%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE+LL Q+KDGF+ GKDLVVSV  AMG+EQINA+KDIG K
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 5.062e-81
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTDENLLS IKDGF  GKDLVVSV  AMG+EQINALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.512e-80
Identity = 145/159 (91.19%), Postives = 151/159 (94.97%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEH FESKADAGASKT+PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTD++LLSQIKDGF  GKDLVVSV  AMG+EQINALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 7.309e-80
Identity = 145/159 (91.19%), Postives = 150/159 (94.34%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEH FESKADAGASKT+PQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+NLL+QIKDGF  GKDLVVSV  AMG+EQI ALKDIGPK
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 8.081e-79
Identity = 142/159 (89.31%), Postives = 149/159 (93.71%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFN KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+K GFE GKDLV+SV  AMG+EQI A+KDIG K
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.055e-78
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFESKADAGASKT+PQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL+Q+K GFE GKDLV+SV  AMG+EQI A+KDIG K
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.071e-78
Identity = 141/159 (88.68%), Postives = 149/159 (93.71%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFE  ADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT+NG+TKDDL+LPTD++LL+QIKDGF  GKDLVVSV  AMG+EQI ALKDIGPK
Sbjct:    1 MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159
[Close]
BLAST of EY744242 vs. ExPASy Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 4.011e-78
Identity = 140/159 (88.05%), Postives = 148/159 (93.08%), Query Frame = 2 
Query:   92 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGKEQINALKDIGPK 568
            MSDEEHHFESKADAGASKT+PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+NLL+ IKDGF  GKDLV+SV  AMG+EQI  +KD+GPK
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
The following BLAST results are available for this feature:
BLAST of EY744242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
IF5A2_SOLLC5.979e-8291.82Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A_MANES2.968e-8192.45Eukaryotic translation initiation factor 5A OS=Man... [more]
IF5A3_SOLTU2.968e-8191.19Eukaryotic translation initiation factor 5A-3 OS=S... [more]
IF5A3_SOLLC5.062e-8192.45Eukaryotic translation initiation factor 5A-3 OS=S... [more]
IF5A4_SOLTU2.512e-8091.19Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A2_NICPL7.309e-8091.19Eukaryotic translation initiation factor 5A-2 OS=N... [more]
IF5A4_SOLLC8.081e-7989.31Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A1_SOLTU1.055e-7889.31Eukaryotic translation initiation factor 5A-1/2 OS... [more]
IF5A2_MEDSA3.071e-7888.68Eukaryotic translation initiation factor 5A-2 OS=M... [more]
IF5A1_TOBAC4.011e-7888.05Eukaryotic translation initiation factor 5A-1 OS=N... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-E01-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744242 ID=EY744242; Name=EY744242; organism=Citrus sinensis; type=EST; length=880bp
CCCGCGTCCGCGGACGCGTGGGAGGTATAGTTCGATTCTAACAAAATTTG
GTTGTCGAAGCTCTAATTGTGAATCGCAGGAACCAGACGATATGTCGGAC
GAAGAGCACCACTTTGAGTCGAAGGCCGACGCCGGCGCCTCCAAGACATT
TCCTCAGCAGGCCGGAACGATTCGCAAAAACGGTTATATCGTCATCAAAG
GTCGTCCTTGCAAGGTTGTTGAGGTTTCAACTTCCAAGACTGGAAAGCAC
GGTCATGCTAAGTGTCACTTTGTAGGAATTGACATCTTCAATGGCAAGAA
GCTTGAGGATATTGTTCCCTCTTCCCACAACTGTGATGTTCCTCATGTCA
CTCGCACTGACTACCAGCTGATTGATATCTCTGAGGATGGATTTGTTAGC
CTGCTGACTGAGAATGGCAATACCAAGGATGACCTGAGACTTCCAACTGA
TGAAAATCTGCTTTCACAGATCAAGGATGGATTTGAGAGTGGGAAAGATC
TGGTTGTCTCAGTTCAGTGTGCTATGGGAAAGGAGCAGATCAATGCCCTG
AAGGACATTGGCCCCAAGTAAAAAACTTTTTGCTTTGATCGAGAATGCAA
ATTGCTGAAACCTGTGGGAAAGGGGGAAAATAATGAAGCTTACTGGGGGC
CGGTTTTCAGAAGAATGTCCTCATTTTCTATAAAAGGACCCTTTACCCAT
ATTATTAATTGTTTTCTACCCGCAATATTTTTTTATTCCGGTTGGATTGG
TTGGAAATTTAAAAACGGGGTTGTTCCCGGGGGGGAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAGGGGGGGCCCGCCCCAAGGGAATCCCAGCCTTTCA
TACCGCGGGGGGTGGGAAACGTAATTACCT
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