EY744234

Overview
NameEY744234
Unique NameEY744234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12958 contig Csv1_Contig12958:170..645. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 2.363e-42
Identity = 87/91 (95.60%), Postives = 90/91 (98.90%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + ++VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   54 SKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 144          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 3.086e-42
Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            A +++ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   51 AKKSIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 141          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 4.031e-42
Identity = 86/89 (96.63%), Postives = 89/89 (100.00%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   46 KSVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 134          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 6.876e-42
Identity = 86/89 (96.63%), Postives = 89/89 (100.00%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   55 KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 143          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.876e-42
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + + VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   43 SKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 133          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 6.876e-42
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + + VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   54 SKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 144          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 168.318 bits (425), Expect = 1.532e-41
Identity = 85/89 (95.51%), Postives = 89/89 (100.00%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   58 KSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 146          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 2.001e-41
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + ++VETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   45 SKKSVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 135          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 2.613e-41
Identity = 85/89 (95.51%), Postives = 87/89 (97.75%), Query Frame = 2
Query:   11 ETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            ++ ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:   40 KSTETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 128          
BLAST of EY744234 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 2.613e-41
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 2
Query:    5 ASETVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 277
            + + +ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTK
Sbjct:   44 SKKNIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTK 134          
The following BLAST results are available for this feature:
BLAST of EY744234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
H2B1_MEDTR2.363e-4295.60Probable histone H2B.1 OS=Medicago truncatula PE=3... [more]
H2B_CAPAN3.086e-4294.51Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3[more]
H2B3_MEDTR4.031e-4296.63Probable histone H2B.3 OS=Medicago truncatula PE=3... [more]
H2B_GOSHI6.876e-4296.63Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV... [more]
H2B3_SOLLC6.876e-4294.51Histone H2B.3 (Fragment) OS=Solanum lycopersicum G... [more]
H2B1_ARATH6.876e-4294.51Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790... [more]
H2B11_ARATH1.532e-4195.51Histone H2B.11 OS=Arabidopsis thaliana GN=At5g5991... [more]
H2B4_ARATH2.001e-4192.31Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470... [more]
H2B9_ARATH2.613e-4195.51Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570... [more]
H2B8_ARATH2.613e-4192.31Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-D05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744234 ID=EY744234; Name=EY744234; organism=Citrus sinensis; type=EST; length=476bp
CCACGCGTCCGAGACCGTGGAGACCTACAAGATCTACATATTCAAGGTGC
TGAAGCAGGTGCATCCTGACATAGGAATCTCCAGCAAGGCCATGGGTATC
ATGAACAGCTTTATCAACGATATCTTCGAGAAATTGGCTCAGGAGTCGTC
TCGTCTCGCGAGATACAACAAGAAGCCCACTATCACTTCTCGTGAGATCC
AGACTGCTGTTAGACTTGTCTTGCCCGGTGAGCTTGCCAAGCATGCCGTT
TCTGAAGGCACTAAGGCTGTCACTAAGTTTACTAGCTCTTAATGAACCTA
TAGCTTCAATAATTCAATTAGTATCTTCTCTTTCTAGCTTGGGCTCTGCA
ATTTTTAAGGTCCTGTTTCTTTTATTTTCCTTTTGGTTGTAGATTTTCTC
TTTTGTTTACTTTTTGTATCTACCCTACCCAACAACCTAATCGAAGTTCT
TTTTGCTCAAAAAAAAAAAAAAAAAA
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