EY744222

Overview
NameEY744222
Unique NameEY744222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1004
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744222_ssr622 microsatellite EY744222_ssr622:622..633. BLAST: Citrus ESTs to Prunus persica proteins V1
EY744222_ssr645 microsatellite EY744222_ssr645:645..656. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.865e-31
Identity = 77/149 (51.68%), Postives = 87/149 (58.39%), Query Frame = 1
Query:  154 HGKRPLPLEASPEEKEKEQDNN-FPAWTTHES-DMSAMVSALTQVIGXXXXXXXXXXXXXXVKEESSDNPLXXXXXXXXXXEGTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 594
            +GKRP   + S E+KE + D N FP ++     DM AMVSALTQVIG              V  +   NP              R+RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTFET            LKFKG+KAKLNFPER Q
Sbjct:    7 YGKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNNQHQPVVYNQQDPNPPAPPTQDQGLL---RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQ 152          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.484e-30
Identity = 78/152 (51.32%), Postives = 87/152 (57.24%), Query Frame = 1
Query:  154 HGKRPLPLEASPEEKEKEQDNN-FPAWTTH-ESDMSAMVSALTQVIGXXXXXXXXXXXXXXVKEESSDNPLXXXXXXXXXXEGT---RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 594
            +GKRP       E +E+E+D N FP ++   + DM  MVSALTQVIG                  S  NP           +     RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET            LKFKG+KAKLNFPERVQ
Sbjct:    2 YGKRPF---GGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDNYPSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQ 150          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.330e-26
Identity = 61/97 (62.89%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  400 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTTEFVYLNXXXXXXXXXXXXXXVMPAPPPRP 690
            RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFET            LKFKGTKAKLNFPERVQG T    ++               M +PPPRP
Sbjct:   35 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAPRGVSES------MNSPPPRP 125          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.601e-20
Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  157 GKRPLPLEASPEEKEKEQDNNFPAWTTHESDMSAMVSALTQVIGXXXXXXXXXXXXXXVKEESSDNPLXXXXXXXXXXEGTRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 594
            GKRPL  E+    +E++++    + T  ESD+S  VS LT                  + ++SS   L            +R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTF+T             +F+G KAKLNFPE ++
Sbjct:    4 GKRPLSPESMAGNREEKKELCCCS-TLSESDVSDFVSELT-----------GQPIPSSIDDQSSSLTLQEK-------SNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIR 130          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.038e-19
Identity = 58/137 (42.34%), Postives = 69/137 (50.36%), Query Frame = 1
Query:  250 MSAMVSALTQVIGXXXXXXXXXXXXXX---------------------VKEESSDNPLXXXXXXXXXXEGT-RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 594
            MSAMVSALTQV+                                     + +SS NP+          E   ++R YRGVRQRPWGKWAAEIRDP +AARVWLGTF+T            L+F+G KAKLNFPE V+
Sbjct:    1 MSAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVR 137          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.556e-18
Identity = 43/64 (67.19%), Postives = 47/64 (73.44%), Query Frame = 1
Query:  400 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERV 591
            R + YRGVRQRPWGKWAAEIRDP KA RVWLGTFET            L+F+G+KAKLNFPE V
Sbjct:   57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENV 120          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.556e-18
Identity = 43/64 (67.19%), Postives = 47/64 (73.44%), Query Frame = 1
Query:  403 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQ 594
            RR YRGVRQRPWGKWAAEIRDP KAARVWLGTF+             L+F+G KAKLNFPE V+
Sbjct:  182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVK 245          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.960e-16
Identity = 46/120 (38.33%), Postives = 58/120 (48.33%), Query Frame = 1
Query:  400 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPERVQGTTEFVYLNXXXXXXXXXXXXXXVMPAPPPRPNSMHQGAYPELLQNAQNSTFGRC 759
            R+  YRG+RQRPWGKWAAEIRDP++ AR+WLGTF+T             + +G+KAK+NFPE           N                P   P PN       P L+QN+  S    C
Sbjct:  121 RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEE----------NMKANSQKRSVKANLQKPVAKPNPNPS-----PALVQNSNISFENMC 225          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 9.090e-16
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 1
Query:  400 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFPE 585
            R+  YRG+RQRPWGKWAAEIRDP+K +R WLGTF+T             + +GTKAK+NFPE
Sbjct:  124 RKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 185          
BLAST of EY744222 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.551e-15
Identity = 37/61 (60.66%), Postives = 42/61 (68.85%), Query Frame = 1
Query:  400 RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETXXXXXXXXXXXXLKFKGTKAKLNFP 582
            R+  YRG+RQRPWGKWAAEIRDP K  RVWLGTF+T            +K +G KAKLNFP
Sbjct:   46 RKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106          
The following BLAST results are available for this feature:
BLAST of EY744222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
EF115_ARATH5.865e-3151.68Ethylene-responsive transcription factor ERF115 OS... [more]
EF114_ARATH6.484e-3051.32Ethylene-responsive transcription factor ERF114 OS... [more]
EF113_ARATH3.330e-2662.89Ethylene-responsive transcription factor ERF113 OS... [more]
EF112_ARATH1.601e-2041.78Ethylene-responsive transcription factor ERF112 OS... [more]
EF110_ARATH1.038e-1942.34Ethylene-responsive transcription factor ERF110 OS... [more]
RAP26_ARATH2.556e-1867.19Ethylene-responsive transcription factor RAP2-6 OS... [more]
ABR1_ARATH2.556e-1867.19Ethylene-responsive transcription factor ABR1 OS=A... [more]
RA212_ARATH6.960e-1638.33Ethylene-responsive transcription factor RAP2-12 O... [more]
RAP22_ARATH9.090e-1658.06Ethylene-responsive transcription factor RAP2-2 OS... [more]
ERF71_ARATH1.551e-1560.66Ethylene-responsive transcription factor ERF071 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-C04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744222 ID=EY744222; Name=EY744222; organism=Citrus sinensis; type=EST; length=1004bp
CTCAACTTCCATGTCTACAGGTCTGTTAACAAAACCAAACAAAACAATTA
CTTTTTCCGTTGTATGTAATAAAATCCAATAAAAAAATTATTGCATTACA
TTAGAGTTTATAGAAGTGCTTATTGTAACTGCAAAAAAGTGGATCATCGA
AGGCATGGAAAGCGGCCACTTCCACTGGAAGCATCACCGGAGGAGAAAGA
GAAAGAACAAGACAACAACTTCCCTGCTTGGACTACTCATGAATCAGACA
TGTCTGCCATGGTTTCCGCTCTTACACAAGTAATTGGCACCACTACCACC
GACGCCGACGCCGACCCCTCGCCGGCAGCCGTTAAAGAAGAATCCTCCGA
TAACCCACTTCAACAAACTCAAACTCAAGATCAAGATCAAGAAGGTACAA
GGAGGAGACATTACAGAGGAGTAAGACAAAGACCTTGGGGCAAATGGGCA
GCCGAAATTAGAGACCCTAAAAAGGCAGCACGAGTATGGCTAGGTACATT
TGAGACTGCTGAAGATGCAGCCATGGCTTATGATAAAGCTGCCCTCAAAT
TCAAAGGCACCAAAGCTAAGCTTAATTTCCCTGAAAGAGTTCAGGGTACT
ACTGAGTTTGTGTATTTAAATTCATCATCATCAAGCTCTGCCTTTCATCA
TCATCATGAGTCGGTGATGCCTGCTCCTCCTCCCAGGCCTAACTCAATGC
ACCAGGGGGCATACCCGGAATTGCTTCAAAATGCCCAAAATTCAACCTTC
GGAAGATGCCAACTTTTAATTAACAAAACTTCCAAACCCCTTTAAACCCA
CAATCCTTCTACTTGGGTTCTTCTTTTCAACCCCCTTTCACGTTTTTTCC
TCCCTCCCTACTCACCCCCCATTGGGAAAAAAAACAAAGGGGAAAAAAAA
AAAAAAAATTTTTTCCCCAAAAAATTTTGAAAAAAACCGTGGTTCGGGGG
GGTTTTTAATTTTTTTTTAAAAGAATAAAATAATATATAAAAAAAACCCC
CCCC
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