EY744211

Overview
NameEY744211
Unique NameEY744211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY744211_ssr342 microsatellite EY744211_ssr342:342..353. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.652e-19
Identity = 45/75 (60.00%), Postives = 60/75 (80.00%), Query Frame = 1
Query:  409 GAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKKRQGLS 633
            G   DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTRENVASHLQKYR+YL++  G+S
Sbjct:  225 GDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVS 299          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.230e-19
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  379 AENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKK 618
            ++   + G G     + + T K+PR+VW+ +LH++FV AV  LG+  AVPK I+ LMS++GLTRENVASHLQKYRLYLKK
Sbjct:  172 SDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKK 251          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.175e-17
Identity = 41/70 (58.57%), Postives = 58/70 (82.86%), Query Frame = 1
Query:  424 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKKRQGLS 633
            E + +LK+PR+VW+ +LH++FV AV  LG+  AVPK I+++M+V GLTRENVASHLQKYR+YL++  G+S
Sbjct:  209 EDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVS 278          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.780e-16
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 1
Query:  409 GAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKK 618
            G   D+P    K+PR++WT +LH +F+ AV HLG++ AVPK I+ LM+VD LTRENVASHLQK+R+ LKK
Sbjct:  172 GNDNDDPTAQ-KKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 240          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 39/62 (62.90%), Postives = 52/62 (83.87%), Query Frame = 1
Query:  442 KRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKKRQG 627
            K+ R+VW+ +LH++FV+AV  LGI  AVPK I++LM+V GL+RENVASHLQK+RLYLK+  G
Sbjct:  199 KKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRLSG 260          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-15
Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1
Query:  442 KRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKKRQGLS 633
            K+ R+VWT +LHK+FV AV  LG + A+PK I+ LM+V+ LTRENVASHLQK+RLYLK+  G++
Sbjct:  194 KKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRISGVA 257          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: ARR21_ARATH (Putative two-component response regulator ARR21 OS=Arabidopsis thaliana GN=ARR21 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.034e-14
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 1
Query:  367 SDFAAENSAEMGSGGAG--GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKK--RQGL 630
            +D + +N     +GG    G+  ++  K+ ++ WT  LH  F+ A+ H+G+  AVPK I+  MSV  LTRENVASHLQKYR++L++   QGL
Sbjct:  194 TDGSRKNRKRKPNGGPSDDGESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRVAEQGL 285          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.344e-13
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  433 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKK 618
            R L + RL WT QLH++F+ AV HLG   AVPK I+ +M V  LTRE VASHLQKYR+ LKK
Sbjct:  194 RDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 255          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.344e-13
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  433 RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKK 618
            R L + RL WT QLH++F+ AV HLG   AVPK I+ +M V  LTRE VASHLQKYR+ LKK
Sbjct:  194 RDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 255          
BLAST of EY744211 vs. ExPASy Swiss-Prot
Match: APRR2_ARATH (Two-component response regulator-like APRR2 OS=Arabidopsis thaliana GN=APRR2 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.634e-12
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 1
Query:  445 RPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLK 615
            R ++ WTP+LHK+FV AV  LG+  A+P  I++LM V  LTR NVASHLQK+R + K
Sbjct:  296 RKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRK 352          
The following BLAST results are available for this feature:
BLAST of EY744211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ARR1_ARATH3.652e-1960.00Two-component response regulator ARR1 OS=Arabidops... [more]
ARR18_ARATH6.230e-1955.00Two-component response regulator ARR18 OS=Arabidop... [more]
ARR2_ARATH1.175e-1758.57Two-component response regulator ARR2 OS=Arabidops... [more]
ARR10_ARATH3.780e-1658.57Two-component response regulator ARR10 OS=Arabidop... [more]
ARR14_ARATH1.876e-1562.90Two-component response regulator ARR14 OS=Arabidop... [more]
ARR12_ARATH1.876e-1560.94Two-component response regulator ARR12 OS=Arabidop... [more]
ARR21_ARATH6.034e-1443.48Putative two-component response regulator ARR21 OS... [more]
EHD1_ORYSJ1.344e-1361.29Two-component response regulator EHD1 OS=Oryza sat... [more]
EHD1_ORYSI1.344e-1361.29Two-component response regulator EHD1 OS=Oryza sat... [more]
APRR2_ARATH9.634e-1256.14Two-component response regulator-like APRR2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-B04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744211 ID=EY744211; Name=EY744211; organism=Citrus sinensis; type=EST; length=956bp
CCCGCGTCCGATCAGTTCTTGTTTTAATTTTCTTTTTAGTAAATAAATCA
GAGAAAAAGTTAATTGAATTGAGTTTTGAATTTCGAGATAAAAAGAGTGT
CACAAATAATGAGAGAGGACGACTCAAATTGGTTCGCAAGATGGGAAGAA
GATCTTCCCTCCTATGAAGAGCTTATACCTCTCTCTCAAACCCTAATCAG
TCCTGATCTCGCTGTTGCTTTCGATATCCGAAACCCCGTCAACGGCAACG
GCAACGGCAACGGCAACGCCCTTTCGCAGCACCAGCAACTTCAACAGCAA
CAACCACTCACTCCGACCAACAATAACAACAACAGCAATAGCAACAACAA
CAACCCACTTGGGCAGTCTGATTTTGCTGCCGAGAACTCGGCAGAGATGG
GCTCAGGTGGCGCGGGTGGCGACGAGCCCGCTCGTACCCTGAAACGGCCC
CGCCTCGTCTGGACGCCGCAGCTCCATAAAAGATTCGTGGACGCTGTGGC
TCACTTGGGGATCAAGAATGCCGTTCCCAAAACTATAATGCAATTGATGA
GTGTTGATGGGTTGACGAGGGAGAACGTTGCTAGTCATCTACAGAAATAC
CGGCTTTATCTTAAAAAAAGGCAGGGATTGTCCGGCGGAGGTGGTGGCGG
ACCCGGTGGGGTCAACGGTGGCGGTGCCGGGGCTGCGGGGGTCAACCGGA
TTCGGCTACTGCCCCTTGGTTGCAGCCCCCCGGTTTCCGGGTCTTTTCTG
GCCCCGGGGGCCCGGGGAAATTCGAAAATTTCTTGCCCGTATGGGCCTGG
GGGGGGCCCCCCCCCAAAACAAAAGGGGAGGGGGGGGTGGCGGGTGGGAA
TCCCCCTTTTTGAGGGGCACCCCGTATTACAATGGCAAAAAAAATCTTTT
TTTTGGGGCCCCCCCCCACAAGGGGGGGATTTTTGGAACCACTATTTTTT
TTTTTG
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