EY744188

Overview
NameEY744188
Unique NameEY744188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length985
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: TGA21_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.655e-22
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 164
            NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR+LTTRQSARALLAIN+YF
Sbjct:  384 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRVLTTRQSARALLAINEYF 437          
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: TGA2_ARATH (Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.713e-19
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 164
            +YMGQMAMAMGKLGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DYF
Sbjct:  261 SYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYF 314          
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.713e-19
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 164
            +YMGQMAMAMGKLGTLE FLRQADNLR QTLQQM RILTTRQSARALLAI+DYF
Sbjct:  407 SYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYF 460          
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.984e-19
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 161
            NYMGQMAMAMGKLGTLE FL QADNLRQQTLQQM RILTTRQSARALL I+DY
Sbjct:  263 NYMGQMAMAMGKLGTLENFLSQADNLRQQTLQQMQRILTTRQSARALLVISDY 315          
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: TGA6_ARATH (Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.473e-18
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 161
            +YMGQMAMAMG+LGTLEGF+RQADNLR QTLQQM R+LTTRQSARALLAI+DY
Sbjct:  261 SYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDY 313          
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.094e-17
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDY 161
            +YMGQMAMAMGKLGTLEGF+RQADNLR QT QQM R+LTTRQSARALLA+++Y
Sbjct:  261 SYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNY 313          
BLAST of EY744188 vs. ExPASy Swiss-Prot
Match: TGA4_ARATH (Transcription factor TGA4 OS=Arabidopsis thaliana GN=TGA4 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.995e-11
Identity = 33/54 (61.11%), Postives = 42/54 (77.78%), Query Frame = 3
Query:    3 NYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF 164
            +Y+ QM  AM +L  L  F+ QAD+LR +TLQQMHRILTTRQ+AR LLA+ +YF
Sbjct:  293 SYIPQMTCAMERLEALVSFVNQADHLRHETLQQMHRILTTRQAARGLLALGEYF 346          
The following BLAST results are available for this feature:
BLAST of EY744188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TGA21_TOBAC1.655e-2296.30TGACG-sequence-specific DNA-binding protein TGA-2.... [more]
TGA2_ARATH1.713e-1988.89Transcription factor TGA2 OS=Arabidopsis thaliana ... [more]
HBP1C_WHEAT1.713e-1990.74Transcription factor HBP-1b(c1) (Fragment) OS=Trit... [more]
HBP1B_WHEAT4.984e-1990.57Transcription factor HBP-1b(c38) OS=Triticum aesti... [more]
TGA6_ARATH2.473e-1886.79Transcription factor TGA6 OS=Arabidopsis thaliana ... [more]
TGA5_ARATH2.094e-1783.02Transcription factor TGA5 OS=Arabidopsis thaliana ... [more]
TGA4_ARATH4.995e-1161.11Transcription factor TGA4 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-110-G12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744188 ID=EY744188; Name=EY744188; organism=Citrus sinensis; type=EST; length=985bp
CAAACTACATGGGTCAAATGGCCATGGCAATGGGAAAGCTAGGAACTCTT
GAAGGGTTTCTTCGTCAGGCTGATAATCTACGTCAGCAAACTCTACAACA
GATGCATCGTATATTGACCACCCGACAATCAGCTCGTGCGTTGCTCGCAA
TAAATGATTACTTCTCTAGGCTTAGAGCCCTCAGTTCTCTCTGGCTGGCC
CGGCCACGGGAGTGAGAGACAGTTCCCCTTCAAAAAGTTATTCTGAAGGG
TATATGACTTGGTAGATGATTAAATTATAACCACAAGTTTCTGCAGTGAC
AATACAAATTAATACTGGTTAGAGCTCCTCTGTTCTATATCGTTAAGGAG
CAATGGAATGGCTCACATTTGCTGTATTTATAGGTTCCCTCTATATCTGT
AGCTTTAAATATGTTCATTTAGGTTTTGAATGCTTATTGTGTTGGAAAAT
AATGCTAATAATCTGGTAATGCTGGATGGTTGTTAAAATTTGAAAAATGA
AAATAGGTTTGTATGTAACATAGGGAAAAGTTTTCCACCTTCTTTTTCGA
AATTCGAAATAAAAAAATTCAGGGTTAAAAAATTATTTCCTTTGGGAAAG
GTTCTTATTTCTTCTGGGATTTTTGGGCAATTTAAAACTCCAAAAAGGAA
ATTGGCCCCAGACCCTTTGAAATATTTTTTTCCTTTTACAAATAGGGGAA
TAGAAGAAAAAAAAAAAGATAACGATACGAATACAGCGTGACACATAAAA
ATAAGGAGAAGAGGGGGGGGGGGACTTTAAAAGAAGGAACAAGACAAATA
GATAAGACAGGGGGGGCCAGCGAAAAAATAACATTTTATAAAGAGATGCC
TAAAAATTAATTCTTAGGTGGGAGAAAGCTAATTTTAAAAAAATACGAAG
TAGGCGTGAGAAAAGAAAGGGCGTTGAAGTACCATCGATATTTAAATTCT
GTTGGGTCTAACGAAAAACTATCCCCTATATGTAC
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