EY744183

Overview
NameEY744183
Unique NameEY744183
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY744183 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.387e-24
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 3
Query:   21 QLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 230
            QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS   M+SDAE WNGR AMLGLVALAFTEFVKG +LV
Sbjct:  127 QLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of EY744183 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.488e-22
Identity = 46/73 (63.01%), Postives = 64/73 (87.67%), Query Frame = 3
Query:   12 VFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 230
            VF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF  SDAE+WNGRFAM+GLVALAFTE+VKGG L+
Sbjct:  125 VFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of EY744183 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.691e-17
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 3
Query:   36 GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 230
            G+AWFL T+ + +VASL+PL +G SVESKS G  ++DAELWNGRFAMLGLVALA TEF+ G   V
Sbjct:  165 GLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of EY744183 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.111e-13
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 3
Query:   12 VFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKGGTLV 230
            + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAMLGLVALA TE + G   +
Sbjct:   97 LLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of EY744183 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.475e-13
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   12 VFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNGRFAMLGLVALAFTEFVKG 218
            + +QL  G G AWF  T  +L++ASLVPL +G S E ++   M ++AELWNGRFAM+GLVALA TE + G
Sbjct:   92 LLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
The following BLAST results are available for this feature:
BLAST of EY744183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELI_PEA2.387e-2480.00Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL8.488e-2263.01Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI5_HORVU3.691e-1766.15High molecular mass early light-inducible protein ... [more]
ELI9_HORVU1.111e-1352.70Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU2.475e-1354.29Low molecular mass early light-inducible protein H... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-110-G05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744183 ID=EY744183; Name=EY744183; organism=Citrus sinensis; type=EST; length=1005bp
CGGACGCGTGGGTGTTTGCCCAGTTATCAGACGGTGGGGTTGCCTGGTTC
TTGGGGACCAGTGTTTTGCTCACGGTTGCGTCCCTGGTTCCTTTGTTTAA
AGGTGTCAGCGTGGAGTCTAAATCGGATGGGTTCATGACTTCGGATGCTG
AGTTGTGGAATGGGAGGTTTGCTATGCTGGGCCTTGTTGCTTTGGCTTTC
ACCGAGTTTGTTAAGGGTGGCACCCTTGTTTAAGCTTAATTTTGTTTAGA
TCTGTAGATCTGTATTTTTTTTAACTAATTAATGTATGAGATCCTACTGT
AATTAAATCTCTATTTCTCATGCCNAANAAANNAANNAAAAAAAAAAAAA
AAAANAAAAAAAAAAAANNAAAAAAANAAAAAANAANAAAAATTAAAAAA
ANAATTAAAAAAGAAAGGAAAGGGGAGAGGTCTCTTCGTGAGGGGAGCCA
TATTAGAATCCTTGGACATATTGTTTTTACTGTAGCCGGTTAGGAAAGAA
AGAGGATGCAGGGGGCGGGCACCCATGTTAAGATAAATCCCTCTTTTCGC
ACAGGAGAAATGGAATAAAATTAGGTAAATTAATAAAAACCAAATTATAT
CAATAATGGGGGGCAGTATGAAAAGAAAACAATGAGGAGAGAGGAGAGGC
GTAGTGGGAGACATGGATAAAATTACACACATACGCTCACTACATACCAG
TCAAGCTCCCGACCTCAGGGATAATATAAAGACGAGAGAAATCTACGGGA
CACATATTAAACCATTCTACTTAAAAGATGAGTAGCGGACAGACGATATA
AGGAAGGATAAAAGAGAAAGCAAGAGGCAATGCTGATGAGAAAAAACATA
CAAAAAACACGAGATGAGTGGAATAAATTCGATCAACTCAATCCATAACC
TCTAATCCGCCACTTGCCAATAATAATCGATTATAAAACATCTCTCACGA
CAATGCCATATCACGAAACCGACTACATTTAGTACTGAACGGCATTGGCT
TGACT
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