EY661756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661756 vs. ExPASy Swiss-Prot
Match: CTR9_MOUSE (RNA polymerase-associated protein CTR9 homolog OS=Mus musculus GN=Ctr9 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.375e-28 Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 2 Query: 374 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN 808 + L R + E H ++A +Y +V+ NLYAANG G VLA KG F ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY + + +++LYLAR ++ + Q+CK++LL+A H+APS+ Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSD 750
BLAST of EY661756 vs. ExPASy Swiss-Prot
Match: CTR9_HUMAN (RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens GN=CTR9 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.375e-28 Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 2 Query: 374 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN 808 + L R + E H ++A +Y +V+ NLYAANG G VLA KG F ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY + + +++LYLAR ++ + Q+CK++LL+A H+APS+ Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSD 750
BLAST of EY661756 vs. ExPASy Swiss-Prot
Match: CTR9_XENTR (RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis GN=ctr9 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.520e-27 Identity = 60/145 (41.38%), Postives = 93/145 (64.14%), Query Frame = 2 Query: 374 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN 808 + L R + E H ++A +Y +V+ + NLYAANG G VLA KG ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY + + ++LLYLAR ++ + Q+CK+ LL+A H+AP++ Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQILLKARHVAPND 750
BLAST of EY661756 vs. ExPASy Swiss-Prot
Match: CTR9_XENLA (RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis GN=ctr9 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.423e-27 Identity = 59/145 (40.69%), Postives = 93/145 (64.14%), Query Frame = 2 Query: 374 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLAPSN 808 + L R + E H ++A +Y +V+ + NL+AANG G VLA KG ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY+NCLRKFY + + ++LLYLAR ++ + Q+CK+ LL+A H+AP++ Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQILLKARHVAPND 750
BLAST of EY661756 vs. ExPASy Swiss-Prot
Match: YKD1_CAEEL (TPR repeat-containing protein B0464.2 OS=Caenorhabditis elegans GN=B0464.2 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17 Identity = 44/135 (32.59%), Postives = 80/135 (59.26%), Query Frame = 2 Query: 374 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL 778 +F L N R + E ++++A ++Y + + N+YAANG G VLA K ++ ++D+F+QV+E+ S + DVW+N+AHV + + A++MY + ++KF D+ + YLA+ +Y A + K++L Sbjct: 642 WFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDSTLQHYLAKAYYRANMLNEAKEAL 771 The following BLAST results are available for this feature:
BLAST of EY661756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY661756 ID=EY661756; Name=EY661756; organism=Citrus sinensis; type=EST; length=908bpback to top |