EY720476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_DICDI (Probable geranylgeranyl transferase type-2 subunit beta OS=Dictyostelium discoideum GN=rabggtb PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.058e-27 Identity = 54/107 (50.47%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 115 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNCIL 435 L DKHV+YI+ + KKDSFE V EH+R+NG YWGL++L +L LD +D+ +VI W+L CQ +GGF GN HD H+L TLSAVQ+L +D +D +D + V + ++ Sbjct: 22 LLIDKHVEYIVKLGSKKDSFEYWVTEHIRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSVVDYVV 128
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_HUMAN (Geranylgeranyl transferase type-2 subunit beta OS=Homo sapiens GN=RABGGTB PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.442e-26 Identity = 49/102 (48.04%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 115 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKV 420 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_BOVIN (Geranylgeranyl transferase type-2 subunit beta OS=Bos taurus GN=RABGGTB PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.495e-26 Identity = 49/102 (48.04%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 115 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKV 420 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++++I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D ++++D +KV Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKV 119
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_MOUSE (Geranylgeranyl transferase type-2 subunit beta OS=Mus musculus GN=Rabggtb PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.668e-26 Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 115 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKV 420 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L ++ E+++ +I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D V +++ DKV Sbjct: 26 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKV 127
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_RAT (Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus GN=Rabggtb PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.001e-25 Identity = 49/102 (48.04%), Postives = 75/102 (73.53%), Query Frame = 1 Query: 115 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKV 420 L +KH YI S KKD +E + E+LR++G YWGLT +D++G+L +++E+++ +I CQ E GG + +IGHDPH+LYTLSAVQ+L L+D + +++ DKV Sbjct: 18 LLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKV 119
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_YEAST (Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae GN=BET2 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.267e-20 Identity = 50/102 (49.02%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 115 LAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDES-GGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADK 417 L +KH++YI S++ KK +FE + EHLRLNG YWGLT L +L + +E+VIS++L C D+ G FA HD H+L TLSAVQ+LA +D +D+L D+ Sbjct: 7 LLKEKHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLSCWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDR 108
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_SCHPO (Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe GN=ptb1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.951e-19 Identity = 43/110 (39.09%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 106 MGELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNCIL 435 M L DKH+ Y+ + + D + + EHL ++ YW + +L K D +D+E ++S++L C ESGGFA GHD H+ T+ AVQVLA+ D + ++D DKV++ I+ Sbjct: 1 MAVLLRDKHISYLHDIGNRTDELDFWLKEHLHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKVASYII 110
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: GGTB2_CAEEL (Probable geranylgeranyl transferase type-2 subunit beta OS=Caenorhabditis elegans GN=ggtb-1 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.079e-19 Identity = 39/107 (36.45%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 112 ELAADKHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKVDILDADKVSNCI 432 EL D H +I EK K+S+ ++ EHLR++G YW + +D+ +L+ + E++++++L C++ GG+ GHD H+L+TL AVQ L +F+ ++ DAD +S + Sbjct: 23 ELLKDLHANFINQYEKNKNSYHYIMAEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADADTISEYV 129
BLAST of EY720476 vs. ExPASy Swiss-Prot
Match: PGTB2_CANAL (Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans GN=BET2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16 Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 127 KHVKYIISVEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWILKC-QDESGGFAGNIGHDPHVLYTLSAVQVLALFDK 393 KHV+YI+ E + SFE + EHLR+NG YWG+T L + +L A+ ++DVI +I+ C D++G F HD H+L TLSA+QVL ++D+ Sbjct: 17 KHVQYIVEQESHR-SFEYWLSEHLRMNGLYWGVTALITMNELSALAQQDVIDYIMLCWDDKTGAFGSFPKHDGHILSTLSALQVLKIYDQ 105 The following BLAST results are available for this feature:
BLAST of EY720476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720476 ID=EY720476; Name=EY720476; organism=Citrus sinensis; type=EST; length=861bpback to top |